RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1025141" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1025141 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1437548 1437548 PRJNA1025141_P_NODE_3882_length_413_cov_1.141176_g3821_i0 PRJNA1025141 3882 413 1.141176 4.71305688 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 204 1.04e-47   NTclustered gi|66359883|ref|XM_627120.1| 353152 g3821 i0 78.616 7.19370460048426 318 60 76 8 19 332 380 67 Cryptosporidium parvum Iowa II histone H2A (cgd8_2170) mRNA, complete cds blastn 2971 204 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
2279346 2279346 PRJNA1025141_P_NODE_1162_length_766_cov_2.209235_g1109_i0 PRJNA1025141 1162 766 2.209235 16.9227401 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 193 4.34e-44   NTclustered gi|260323800|dbj|AK318085.1| 5811 g1109 i0 84.08 5.8798955613577 201 31 26 1 230 430 482 283 Toxoplasma gondii cDNA, clone: XTG04568.2, full cDNA, XTG Sugano cDNA library blastn 4504 193 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
9090407 9090407 PRJNA1025141_P_NODE_5408_length_346_cov_1.575092_g5347_i0 PRJNA1025141 5408 346 1.575092 5.44981832 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 204 8.539999999999999e-48   NTclustered gi|1624693841|ref|XM_029011792.1| 189622 g5347 i0 81.855 57.0520231213873 248 39 71 4 8 252 1 245 Babesia ovata elongation factor 2 (BOVATA_028750), partial mRNA blastn 19740 204 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
12916496 12916496 PRJNA1025141_P_NODE_211_length_1467_cov_8.026542_g188_i0 PRJNA1025141 211 1467 8.026542 117.74937114 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 2567 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g188 i0 98.23 1373.14178595774 1469 24 100 1 1 1467 1847 379 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 2014399 2567 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
12916598 12916598 PRJNA1025141_P_NODE_9131_length_255_cov_1.126374_g9070_i0 PRJNA1025141 9131 255 1.126374 2.8722537 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.98e-4   NTclustered gi|916501701|ref|XM_013496211.1| 44415 g9070 i0 100 0.12156862745098 31 0 12 0 152 182 168 138 Eimeria mitis uncharacterized protein (EMH_0046780), partial mRNA blastn 31 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
14191498 14191498 PRJNA1025141_P_NODE_952_length_840_cov_5.035202_g188_i1 PRJNA1025141 952 840 5.035202 42.2956968 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 1474 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g188 i1 98.333 913.092857142857 840 14 100 0 1 840 379 1218 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 766998 1474 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
18014596 18014596 PRJNA1025141_P_NODE_11855_length_244_cov_0.900585_g11794_i0 PRJNA1025141 11855 244 0.900585 2.1974274 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 446 8.639999999999999e-121   NTclustered gi|296004663|ref|XM_002808679.1| 36329 g11794 i0 99.59 3.55737704918033 244 1 100 0 1 244 617 374 Plasmodium falciparum 3D7 conserved Plasmodium protein, unknown function (PF3D7_0614100), partial mRNA blastn 868 446 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
21406170 21406170 PRJNA1025141_P_NODE_10637_length_248_cov_0.880000_g10576_i0 PRJNA1025141 10637 248 0.88 2.1824 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 268 2.05e-67   NTclustered gi|1145258038|ref|XM_020114651.1| 5854 g10576 i0 98.675 2.43548387096774 151 2 61 0 1 151 2412 2562 Plasmodium reichenowi hypothetical protein partial mRNA blastn 604 268 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
23115107 23115107 PRJNA1025141_P_NODE_7279_length_294_cov_1.303167_g7218_i0 PRJNA1025141 7279 294 1.303167 3.83131098 Cryptosporidium baileyi 27987 SAR_Eukaryotes SAR_Eukaryotes 296 1.14e-75   NTclustered gi|193075908|gb|EU741857.1| 27987 g7218 i0 84.899 94.969387755102 298 40 100 4 1 294 310 606 Cryptosporidium baileyi strain ZJJHN27 heart shock protein 70 (HSP70) gene, partial cds blastn 27921 296 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium baileyi
24388811 24388811 PRJNA1025141_P_NODE_12560_length_242_cov_1.230769_g12499_i0 PRJNA1025141 12560 242 1.230769 2.97846098 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 292 1.18e-74   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g12499 i0 89.076 26.0743801652893 238 22 98 3 5 242 171 404 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 6310 292 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;