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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA1025141" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 13 ✖

bioproject 1

  • PRJNA1025141 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
162733 162733 PRJNA1025141_P_NODE_1501_length_676_cov_1.643449_g1442_i0 PRJNA1025141 1501 676 1.643449 11.10971524 Chlamydomonas reinhardtii 3055 Plants Plants 87.9 1.85e-12   NTclustered gi|2082265001|ref|XM_001689780.2| 3055 g1442 i0 78.169 0.210059171597633 142 27 21 4 84 223 545 684 Chlamydomonas reinhardtii ribosomal protein L35 (CHLRE_14g617900v5), mRNA blastn 142 87.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6540939 6540939 PRJNA1025141_P_NODE_2366_length_531_cov_1.674672_g2305_i0 PRJNA1025141 2366 531 1.674672 8.89250832 Chlorella variabilis 554065 Plants Plants 316 1.6699999999999996e-81   NTclustered gi|552830805|ref|XM_005847928.1| 554065 g2305 i0 77.593 58.1826741996233 540 109 100 6 1 531 917 381 Chlorella variabilis hypothetical protein (RACK1) mRNA, complete cds blastn 30895 316 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
7815411 7815411 PRJNA1025141_P_NODE_6647_length_310_cov_1.092827_g6586_i0 PRJNA1025141 6647 310 1.092827 3.3877637 Auxenochlorella protothecoides 3075 Plants Plants 272 2.04e-68   NTclustered gi|760443472|ref|XM_011400503.1| 3075 g6586 i0 86.345 65.9193548387097 249 34 80 0 16 264 3112 3360 Auxenochlorella protothecoides Pyrophosphate-energized vacuolar membrane proton pump 1 partial mRNA blastn 20435 272 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
7815460 7815460 PRJNA1025141_P_NODE_9727_length_250_cov_1.096045_g9666_i0 PRJNA1025141 9727 250 1.096045 2.7401125 Monoraphidium neglectum 145388 Plants Plants 196 9.88e-46   NTclustered gi|926791444|ref|XM_014048742.1| 145388 g9666 i0 82.819 63.4 227 32 90 7 26 250 2027 1806 Monoraphidium neglectum adenosylhomocysteinase mRNA blastn 15850 196 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
9090388 9090388 PRJNA1025141_P_NODE_4168_length_398_cov_1.446154_g4107_i0 PRJNA1025141 4168 398 1.446154 5.75569292 Monoraphidium neglectum 145388 Plants Plants 117 1.33e-21   NTclustered gi|926772141|ref|XM_014039091.1| 145388 g4107 i0 81.046 0.773869346733668 153 23 38 4 241 393 174 28 Monoraphidium neglectum hypothetical protein mRNA blastn 308 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
12483025 12483025 PRJNA1025141_P_NODE_6530_length_313_cov_0.962500_g6469_i0 PRJNA1025141 6530 313 0.9625 3.012625 Eukaryota 2759 Plants Plants 241 5.82e-59   NTclustered gi|2082247947|ref|XM_001698013.2| 3055 g6469 i0 81.481 80.444089456869 297 52 94 1 20 313 190 486 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g278222v5), mRNA blastn 25179 243 0.991769547325103 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17581945 17581945 PRJNA1025141_P_NODE_2574_length_511_cov_1.655251_g2513_i0 PRJNA1025141 2574 511 1.655251 8.45833261 Eukaryota 2759 Plants Plants 259 2.7500000000000003e-64   NTclustered gi|2082260551|ref|XM_001702928.2| 3055 g2513 i0 81.231 58.0665362035225 325 58 63 3 108 431 138 460 Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA blastn 29672 259 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19288587 19288587 PRJNA1025141_P_NODE_916_length_857_cov_1.678571_g868_i0 PRJNA1025141 916 857 1.678571 14.38535347 Chlamydomonas reinhardtii 3055 Plants Plants 353 2.11e-92   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g868 i0 77.99 53.7537922987165 577 117 67 10 227 798 856 285 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 46067 353 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20563875 20563875 PRJNA1025141_P_NODE_10137_length_249_cov_0.875000_g10076_i0 PRJNA1025141 10137 249 0.875 2.17875 Chlorella variabilis 554065 Plants Plants 148 2.7899999999999996e-31   NTclustered gi|552841639|ref|XM_005850301.1| 554065 g10076 i0 79.343 2.29718875502008 213 42 85 2 15 226 274 485 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59600) mRNA, complete cds blastn 572 148 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
20563932 20563932 PRJNA1025141_P_NODE_2537_length_514_cov_2.664399_g2476_i0 PRJNA1025141 2537 514 2.664399 13.69501086 Chlamydomonas reinhardtii 3055 Plants Plants 217 1.69e-51   NTclustered gi|2082267188|ref|XM_043070972.1| 3055 g2476 i0 79.87 8.76264591439689 308 53 59 8 136 440 432 131 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g660150v5), mRNA blastn 4504 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21839696 21839696 PRJNA1025141_P_NODE_4638_length_377_cov_1.013158_g4577_i0 PRJNA1025141 4638 377 1.013158 3.81960566 Chlamydomonas reinhardtii 3055 Plants Plants 217 1.2e-51   NTclustered gi|2082262545|ref|XM_043068796.1| 3055 g4577 i0 82.917 3.18567639257294 240 41 64 0 12 251 1929 2168 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g542800v5), mRNA blastn 1201 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24388832 24388832 PRJNA1025141_P_NODE_1840_length_610_cov_1.581006_g1780_i0 PRJNA1025141 1840 610 1.581006 9.6441366 Chlamydomonas reinhardtii 3055 Plants Plants 342 3.2e-89   NTclustered gi|2082238813|ref|XM_001701728.2| 3055 g1780 i0 78.439 83.6770491803279 538 106 87 9 78 610 767 235 Chlamydomonas reinhardtii ribosomal protein L15 (CHLRE_02g091100v5), mRNA blastn 51043 342 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24388850 24388850 PRJNA1025141_P_NODE_2880_length_482_cov_2.176039_g2819_i0 PRJNA1025141 2880 482 2.176039 10.48850798 Chlamydomonas reinhardtii 3055 Plants Plants 219 4.38e-52   NTclustered gi|2082240135|ref|XM_001699602.2| 3055 g2819 i0 77.984 36.7157676348548 377 64 77 15 26 394 80 445 Chlamydomonas reinhardtii ribosomal protein L27a (CHLRE_02g115200v5), mRNA blastn 17697 219 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;