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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA1025141" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 20 ✖

bioproject 1

  • PRJNA1025141 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
162746 162746 PRJNA1025141_P_NODE_2001_length_582_cov_1.094303_g1941_i0 PRJNA1025141 2001 582 1.094303 6.36884346 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 145 9.22e-30   NTclustered gi|470428251|ref|XM_004338026.1| 1257118 g1941 i0 82.53 0.285223367697594 166 27 28 2 413 577 554 718 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_224400), partial mRNA blastn 166 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
162842 162842 PRJNA1025141_P_NODE_8241_length_273_cov_1.155000_g8180_i0 PRJNA1025141 8241 273 1.155 3.15315 Acytostelium subglobosum 361139 Evosea other_Eukaryota 139 1.87e-28   NTclustered gi|831768889|ref|XM_012897087.1| 1410327 g8180 i0 77.459 49.1538461538462 244 47 88 6 15 254 764 525 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 13419 139 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
2279349 2279349 PRJNA1025141_P_NODE_11802_length_244_cov_2.257310_g11741_i0 PRJNA1025141 11802 244 2.25731 5.5078364 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 204 5.74e-48   NTclustered gi|2329703080|gb|MW239897.1| 523813 g11741 i0 83.26 92.6844262295082 227 32 92 6 3 226 337 560 Diderma floriforme strain MA-Fungi 81015 alpha tubulin (aTUB) gene, partial cds blastn 22615 204 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Diderma Diderma floriforme
2713199 2713199 PRJNA1025141_P_NODE_2643_length_504_cov_1.412993_g2582_i0 PRJNA1025141 2643 504 1.412993 7.12148472 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 87.9 1.35e-12   NTclustered gi|470460327|ref|XM_004341401.1| 1257118 g2582 i0 76.437 0.345238095238095 174 33 34 6 293 462 565 734 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_265890), partial mRNA blastn 174 87.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5265691 5265691 PRJNA1025141_P_NODE_8265_length_273_cov_0.930000_g8204_i0 PRJNA1025141 8265 273 0.93 2.5389 Platyamoeba placida 3454475 Discosea other_Eukaryota 370 6.09e-98   NTclustered gi|33946348|gb|AY294153.1| 197527 g8204 i0 92.337 94.0989010989011 261 19 95 1 6 265 345 85 Platyamoeba placida actin mRNA, partial cds blastn 25689 370 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
6540918 6540918 PRJNA1025141_P_NODE_1386_length_702_cov_4.540541_g1330_i0 PRJNA1025141 1386 702 4.540541 31.87459782 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.32e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g1330 i0 79.235 66.0641025641026 549 104 77 8 14 557 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46377 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9090358 9090358 PRJNA1025141_P_NODE_2468_length_520_cov_2.870246_g2407_i0 PRJNA1025141 2468 520 2.870246 14.9252792 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.31e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g2407 i0 80.795 57.9576923076923 302 58 58 0 141 442 121 422 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30138 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9932238 9932238 PRJNA1025141_P_NODE_9248_length_252_cov_1.932961_g9187_i0 PRJNA1025141 9248 252 1.932961 4.87106172 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 246 9.77e-61   NTclustered gi|66820523|ref|XM_638773.1| 352472 g9187 i0 87.678 51.8293650793651 211 26 84 0 1 211 220 10 Dictyostelium discoideum AX4 hypothetical protein (act22) mRNA, complete cds blastn 13061 246 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
10365945 10365945 PRJNA1025141_P_NODE_11369_length_246_cov_0.890173_g11308_i0 PRJNA1025141 11369 246 0.890173 2.18982558 Dictyostelium purpureum 5786 Evosea other_Eukaryota 233 7.39e-57   NTclustered gi|330805886|ref|XM_003290860.1| 5786 g11308 i0 83.806 162.134146341463 247 38 100 2 1 246 469 224 Dictyostelium purpureum ubiquitin (DICPUDRAFT_57034), mRNA blastn 39885 233 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
10366100 10366100 PRJNA1025141_P_NODE_8749_length_263_cov_0.815789_g8688_i0 PRJNA1025141 8749 263 0.815789 2.14552507 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 158 4.949999999999999e-34   NTclustered gi|470384206|ref|XM_004333979.1| 1257118 g8688 i0 78.125 1.98859315589354 256 51 96 5 11 263 476 729 Acanthamoeba castellanii str. Neff alphaactinin, putative (ACA1_321210), partial mRNA blastn 523 158 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11641365 11641365 PRJNA1025141_P_NODE_210_length_1468_cov_2.346953_g187_i0 PRJNA1025141 210 1468 2.346953 34.45327004 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 944 0   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g187 i0 79.744 52.9754768392371 1328 249 90 17 30 1347 1413 96 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 77768 944 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11641373 11641373 PRJNA1025141_P_NODE_2490_length_518_cov_7.213483_g2429_i0 PRJNA1025141 2490 518 7.213483 37.36584194 Ripella platypodia 2047821 Discosea other_Eukaryota 797 0   NTclustered gi|1269228351|gb|MF683476.1| 2047821 g2429 i0 94.487 101.324324324324 526 13 99 11 2 518 1657 1139 Ripella platypodia clone 23.4.24 18S ribosomal RNA gene, partial sequence blastn 52486 797 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
15465492 15465492 PRJNA1025141_P_NODE_11093_length_246_cov_1.277457_g11032_i0 PRJNA1025141 11093 246 1.277457 3.14254422 Thecamoeba sp. JRG-2011 1078868 Discosea other_Eukaryota 235 2.06e-57   NTclustered gi|345452611|gb|JF694324.1| 1078868 g11032 i0 85.973 91.2764227642276 221 29 89 2 13 232 242 23 Thecamoeba sp. JRG-2011 strain ATCC 50185 clone 2 actin gene, partial cds blastn 22454 235 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba sp. JRG-2011
16739753 16739753 PRJNA1025141_P_NODE_4534_length_382_cov_0.864078_g4473_i0 PRJNA1025141 4534 382 0.864078 3.30077796 Acytostelium subglobosum 361139 Evosea other_Eukaryota 165 4.48e-36   NTclustered gi|831788452|ref|XM_012903297.1| 1410327 g4473 i0 75.74 11.196335078534 338 76 88 5 48 382 1907 1573 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 4277 165 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
19288452 19288452 PRJNA1025141_P_NODE_1216_length_749_cov_1.596154_g1161_i0 PRJNA1025141 1216 749 1.596154 11.95519346 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 145 1.2e-29   NTclustered gi|470428251|ref|XM_004338026.1| 1257118 g1161 i0 82.53 0.221628838451268 166 27 22 2 580 744 554 718 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_224400), partial mRNA blastn 166 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20130530 20130530 PRJNA1025141_P_NODE_2616_length_507_cov_1.580645_g2555_i0 PRJNA1025141 2616 507 1.580645 8.01387015 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 333 1.58e-86   NTclustered gi|167859735|gb|EU273448.1| 498005 g2555 i0 80.178 86.3570019723866 449 85 88 4 59 505 141 587 Nolandella sp. ATCC 50913 alpha-tubulin gene, partial cds blastn 43783 333 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Nolandella Nolandella sp. ATCC 50913
21839673 21839673 PRJNA1025141_P_NODE_358_length_1230_cov_12.764909_g332_i0 PRJNA1025141 358 1230 12.764909 157.0083807 Ripella sp. 805 1217113 Discosea other_Eukaryota 1814 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g332 i0 94.894 95.9512195121951 1175 35 95 15 1 1172 1153 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 118020 1814 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
23115001 23115001 PRJNA1025141_P_NODE_12539_length_242_cov_1.473373_g12478_i0 PRJNA1025141 12539 242 1.473373 3.56556266 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 359 1.15e-94   NTclustered gi|421976355|gb|JQ519494.1| 5778 g12478 i0 93.388 6.89256198347107 242 16 100 0 1 242 414 173 Vermamoeba vermiformis clone JG10.150_g4 elongation factor 2 alpha gene, partial cds blastn 1668 359 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23115055 23115055 PRJNA1025141_P_NODE_3959_length_409_cov_0.907738_g3898_i0 PRJNA1025141 3959 409 0.907738 3.71264842 Dictyostelium discoideum 44689 Evosea other_Eukaryota 518 3.22e-142   NTclustered gi|66821326|ref|XM_639065.1| 352472 g3898 i0 89.487 97.8630806845966 409 43 100 0 1 409 1072 664 Dictyostelium discoideum AX4 hypothetical protein (act13) mRNA, complete cds blastn 40026 518 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24388833 24388833 PRJNA1025141_P_NODE_1920_length_595_cov_1.306513_g1860_i0 PRJNA1025141 1920 595 1.306513 7.77375235 Platyamoeba placida 3454475 Discosea other_Eukaryota 758 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g1860 i0 89.713 101.361344537815 593 61 99 0 1 593 1076 484 Platyamoeba placida actin mRNA, partial cds blastn 60310 758 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;