RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA1022587" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1022587 · 20 ✖

analysis 1

  • blastn · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1004142 1004142 PRJNA1022587_S_NODE_721_length_304_cov_6.225108_g719_i0 PRJNA1022587 721 304 6.225108 18.92432832 Ascomycota 4890 Fungi Fungi 560 3.81e-155   NTclustered gi|1134949146|gb|KX237674.1| 4909 g719 i0 100 99.6710526315789 303 0 99 0 2 304 581 279 Pichia kudriavzevii isolate YNCA9005 large subunit ribosomal RNA gene, partial sequence blastn 30300 560 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Pichia Pichia kudriavzevii
2279320 2279320 PRJNA1022587_S_NODE_1182_length_257_cov_7.054348_g1180_i0 PRJNA1022587 1182 257 7.054348 18.12967436 root 1 Root_unresolved Root_unresolved 475 1.1699999999999999e-129   NTclustered gi|1389182097|gb|CP029160.1| 4932 g1180 i0 100 113.700389105058 257 0 100 0 1 257 3881781 3881525 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 29221 475 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
2713113 2713113 PRJNA1022587_S_NODE_723_length_304_cov_1.969697_g721_i0 PRJNA1022587 723 304 1.969697 5.98787888 Botrytis cinerea 40559 Fungi Fungi 562 1.06e-155   NTclustered gi|1377701976|ref|XM_001553552.2| 332648 g721 i0 100 33.7565789473684 304 0 100 0 1 304 695 392 Botrytis cinerea B05.10 hypothetical protein (BCIN_01g09530), mRNA blastn 10262 562 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
4832145 4832145 PRJNA1022587_S_NODE_1064_length_267_cov_6.721649_g1062_i0 PRJNA1022587 1064 267 6.721649 17.94680283 Opisthokonta 33154 Fungi Fungi 494 3.38e-135   NTclustered gi|1134949146|gb|KX237674.1| 4909 g1062 i0 100 105 267 0 100 0 1 267 287 21 Pichia kudriavzevii isolate YNCA9005 large subunit ribosomal RNA gene, partial sequence blastn 28035 494 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Pichia Pichia kudriavzevii
4832150 4832150 PRJNA1022587_S_NODE_1624_length_212_cov_6.266187_g1622_i0 PRJNA1022587 1624 212 6.266187 13.28431644 root 1 Root_unresolved Root_unresolved 392 9.67e-105   NTclustered gi|1354561844|gb|MH023283.1| 4932 g1622 i0 100 108 212 0 100 0 1 212 82 293 Saccharomyces cerevisiae strain GITA551 small subunit ribosomal RNA gene, partial sequence blastn 22896 392 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
6540857 6540857 PRJNA1022587_S_NODE_1446_length_245_cov_0.895349_g1444_i0 PRJNA1022587 1446 245 0.895349 2.19360505 Botrytis cinerea 40559 Fungi Fungi 442 1.1199999999999994e-119   NTclustered gi|1377721223|ref|XM_001547393.2| 332648 g1444 i0 99.184 6.51020408163265 245 2 100 0 1 245 783 1027 Botrytis cinerea B05.10 hypothetical protein (BCIN_15g02550), mRNA blastn 1595 442 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
6540861 6540861 PRJNA1022587_S_NODE_86_length_634_cov_1.495544_g84_i0 PRJNA1022587 86 634 1.495544 9.48174896 Botrytis cinerea 40559 Fungi Fungi 1166 0   NTclustered gi|1377721223|ref|XM_001547393.2| 332648 g84 i0 99.842 7.57570977917981 634 1 100 0 1 634 1023 1656 Botrytis cinerea B05.10 hypothetical protein (BCIN_15g02550), mRNA blastn 4803 1166 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
9932183 9932183 PRJNA1022587_S_NODE_268_length_419_cov_7.378613_g266_i0 PRJNA1022587 268 419 7.378613 30.91638847 root 1 Root_unresolved Root_unresolved 774 0   NTclustered gi|1389182097|gb|CP029160.1| 4932 g266 i0 100 113.026252983294 419 0 100 0 1 419 3882252 3881834 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 47358 774 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
11641283 11641283 PRJNA1022587_S_NODE_1310_length_250_cov_0.870056_g1308_i0 PRJNA1022587 1310 250 0.870056 2.17514 Botrytis cinerea 40559 Fungi Fungi 462 8.83e-126   NTclustered gi|1377713460|ref|XM_001552547.2| 332648 g1308 i0 100 7.4 250 0 100 0 1 250 2133 2382 Botrytis cinerea B05.10 Bchex1 (Bchex1), mRNA blastn 1850 462 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
17581921 17581921 PRJNA1022587_S_NODE_274_length_416_cov_2.040816_g272_i0 PRJNA1022587 274 416 2.040816 8.48979456 Botrytis 33196 Fungi Fungi 758 0   NTclustered gi|5830800|emb|AL115584.1| 40559 g272 i0 99.758 23.3509615384615 413 1 99 0 4 416 413 1 Botrytis cinerea strain T4 cDNA library blastn 9714 758 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
17581923 17581923 PRJNA1022587_S_NODE_654_length_314_cov_1.091286_g652_i0 PRJNA1022587 654 314 1.091286 3.42663804 Botrytis 33196 Fungi Fungi 580 3.0299999999999992e-161   NTclustered gi|5825702|emb|AL111082.1| 40559 g652 i0 100 7.46496815286624 314 0 100 0 1 314 181 494 Botrytis cinerea strain T4 cDNA library blastn 2344 580 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
18014546 18014546 PRJNA1022587_S_NODE_1315_length_249_cov_1.732955_g1313_i0 PRJNA1022587 1315 249 1.732955 4.31505795 Botrytis cinerea 40559 Fungi Fungi 455 1.47e-123   NTclustered gi|5825825|emb|AL111206.1| 40559 g1313 i0 99.6 26.8674698795181 250 0 100 1 1 249 318 69 Botrytis cinerea strain T4 cDNA library blastn 6690 455 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
18014549 18014549 PRJNA1022587_S_NODE_435_length_360_cov_1.163763_g433_i0 PRJNA1022587 435 360 1.163763 4.1895468 Botrytis cinerea 40559 Fungi Fungi 660 0   NTclustered gi|1377701976|ref|XM_001553552.2| 332648 g433 i0 99.722 13.3388888888889 360 1 100 0 1 360 872 1231 Botrytis cinerea B05.10 hypothetical protein (BCIN_01g09530), mRNA blastn 4802 660 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
18014552 18014552 PRJNA1022587_S_NODE_735_length_303_cov_1.339130_g733_i0 PRJNA1022587 735 303 1.33913 4.0575639 Botrytis cinerea 40559 Fungi Fungi 560 3.79e-155   NTclustered gi|1377716111|ref|XM_001552365.2| 332648 g733 i0 100 9 303 0 100 0 1 303 960 658 Botrytis cinerea B05.10 Bcgst3 (Bcgst3), mRNA blastn 2727 560 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
19288412 19288412 PRJNA1022587_S_NODE_1176_length_258_cov_1.248649_g1174_i0 PRJNA1022587 1176 258 1.248649 3.22151442 Botrytis cinerea 40559 Fungi Fungi 477 3.2699999999999985e-130   NTclustered gi|5829118|emb|AL114499.1| 40559 g1174 i0 100 14.2325581395349 258 0 100 0 1 258 76 333 Botrytis cinerea strain T4 cDNA library blastn 3672 477 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
20563862 20563862 PRJNA1022587_S_NODE_157_length_508_cov_1.742529_g155_i0 PRJNA1022587 157 508 1.742529 8.85204732 Botrytis cinerea 40559 Fungi Fungi 933 0   NTclustered gi|5825968|emb|AL111349.1| 40559 g155 i0 99.803 19.9055118110236 508 1 100 0 1 508 516 9 Botrytis cinerea strain T4 cDNA library blastn 10112 933 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
23956420 23956420 PRJNA1022587_S_NODE_1059_length_268_cov_1.184615_g1057_i0 PRJNA1022587 1059 268 1.184615 3.1747682 Botrytis 33196 Fungi Fungi 490 4.39e-134   NTclustered gi|5826391|emb|AL111772.1| 40559 g1057 i0 99.627 79.4216417910448 268 1 100 0 1 268 391 124 Botrytis cinerea strain T4 cDNA library blastn 21285 490 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
23956424 23956424 PRJNA1022587_S_NODE_599_length_321_cov_1.528226_g597_i0 PRJNA1022587 599 321 1.528226 4.90560546 Botrytis 33196 Fungi Fungi 582 8.639999999999997e-162   NTclustered gi|5829227|emb|AL114608.1| 40559 g597 i0 99.377 28.0467289719626 321 2 100 0 1 321 352 32 Botrytis cinerea strain T4 cDNA library blastn 9003 582 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
24388775 24388775 PRJNA1022587_S_NODE_300_length_409_cov_1.586310_g298_i0 PRJNA1022587 300 409 1.58631 6.4880079 Botrytis cinerea 40559 Fungi Fungi 756 0   NTclustered gi|1377713997|ref|XM_024695026.1| 332648 g298 i0 100 8.37163814180929 409 0 100 0 1 409 1750 1342 Botrytis cinerea B05.10 Bcap1 (Bcap1), mRNA blastn 3424 756 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
25230354 25230354 PRJNA1022587_S_NODE_360_length_382_cov_4.061489_g358_i0 PRJNA1022587 360 382 4.061489 15.51488798 root 1 Root_unresolved Root_unresolved 701 0   NTclustered gi|1275558205|ref|NG_055690.1| 4931 g358 i0 99.738 116.581151832461 382 1 100 0 1 382 2907 3288 Saccharomyces bayanus NRRL Y-12624 28S rRNA gene, partial sequence; from TYPE material blastn 44534 706 0.992917847025496 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces bayanus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;