RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1022587" and tax_clade = "RNA satellites"

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tax_superkingdom 1

tax_clade 1

  • RNA satellites · 2 ✖

bioproject 1

  • PRJNA1022587 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2279325 2279325 PRJNA1022587_S_NODE_22_length_988_cov_3.144262_g20_i0 PRJNA1022587 22 988 3.144262 31.06530856 Viruses 10239 Viruses Viruses 867 0   NTclustered gi|1408257600|ref|NC_037663.1| 2219109 g20 i0 97.624 5.1497975708502 505 12 51 0 3 507 3905 3401 Botrytis cinerea hypovirus 1 satellite-like RNA, complete genome blastn 5088 872 0.994266055045872 Viruses RNA satellites             Botrytis cinerea hypovirus 1 satellite-like RNA
6107317 6107317 PRJNA1022587_S_NODE_65_length_691_cov_4.220065_g63_i0 PRJNA1022587 65 691 4.220065 29.16064915 Viruses 10239 Viruses Viruses 1184 0   NTclustered gi|1408257600|ref|NC_037663.1| 2219109 g63 i0 97.678 8.01302460202605 689 16 99 0 3 691 3905 3217 Botrytis cinerea hypovirus 1 satellite-like RNA, complete genome blastn 5537 1190 0.994957983193277 Viruses RNA satellites             Botrytis cinerea hypovirus 1 satellite-like RNA

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;