RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1022392" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1022392 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8656916 8656916 PRJNA1022392_P_NODE_27867_length_206_cov_4.842767_g27198_i0 PRJNA1022392 27867 206 4.842767 9.97610002 Glugeidae 36735 Fungi Fungi 182 2.2e-41   NTclustered gi|1018192771|gb|KT964889.1| 103443 g27198 i0 100 86.9320388349515 98 0 94 0 1 98 638 541 Loma acerinae isolate GB6 16S ribosomal RNA gene, partial sequence blastn 17908 182 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Loma Loma acerinae
9089457 9089457 PRJNA1022392_P_NODE_19328_length_243_cov_5.193878_g18659_i0 PRJNA1022392 19328 243 5.193878 12.62112354 Pleistophora mulleri 249366 Fungi Fungi 231 2.6199999999999997e-56   NTclustered gi|134147422|gb|EF119339.1| 249366 g18659 i0 95.205 18.559670781893 146 7 60 0 2 147 2435 2290 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 4510 231 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
12916071 12916071 PRJNA1022392_P_NODE_59751_length_177_cov_3.646154_g59082_i0 PRJNA1022392 59751 177 3.646154 6.45369258 Fusasporis stethaprioni 2777717 Fungi Fungi 283 4.87e-72   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g59082 i0 95.506 100.655367231638 178 6 100 2 1 177 1040 1216 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 17816 283 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;