RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1022392" and tax_clade = "Sar"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA1022392 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18013728 18013728 PRJNA1022392_P_NODE_20575_length_235_cov_1.510638_g19906_i0 PRJNA1022392 20575 235 1.510638 3.5499993 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 344 3.0999999999999993e-90   NTclustered gi|820695469|tpe|LN714488.1| 572307 g19906 i0 93.191 40.0085106382979 235 15 100 1 1 235 300544 300311 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9402 344 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
21839312 21839312 PRJNA1022392_P_NODE_65838_length_170_cov_1.292683_g65169_i0 PRJNA1022392 65838 170 1.292683 2.1975611 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 207 2.87e-49   NTclustered gi|820695469|tpe|LN714488.1| 572307 g65169 i0 89.697 1.93529411764706 165 14 97 3 6 169 80573 80411 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 329 207 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;