RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1022139" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7814209 7814209 PRJNA1022139_P_NODE_23827_length_289_cov_1.361111_g23722_i0 PRJNA1022139 23827 289 1.361111 3.93361079 Halichondria panicea 6063 Porifera other_Eukaryota 150 9.22e-32   NTclustered gi|1808989562|gb|MN103210.1| 6063 g23722 i0 79.263 3.11418685121107 217 43 75 2 74 289 7137 6922 Halichondria panicea serine/threonine-protein kinase mTOR mRNA, complete cds blastn 900 150 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
14190318 14190318 PRJNA1022139_P_NODE_31772_length_260_cov_1.459893_g31667_i0 PRJNA1022139 31772 260 1.459893 3.7957218 Dysidea avara 196820 Porifera other_Eukaryota 178 3.749999999999999e-40   NTclustered gi|2749522128|ref|XM_066030059.1| 196820 g31667 i0 79.608 32.1307692307692 255 46 97 5 1 252 207 458 PREDICTED: Dysidea avara ras-related protein Rab-11A-like (LOC136239326), mRNA blastn 8354 178 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;