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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1022139" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
161605 161605 PRJNA1022139_P_NODE_2381_length_797_cov_8.785912_g2296_i0 PRJNA1022139 2381 797 8.785912 70.02371864 Platyamoeba placida 3454475 Discosea other_Eukaryota 970 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g2296 i0 90.871 94.0639899623588 723 66 91 0 75 797 1182 460 Platyamoeba placida actin mRNA, partial cds blastn 74969 970 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
1436292 1436292 PRJNA1022139_P_NODE_10282_length_415_cov_4.301170_g10177_i0 PRJNA1022139 10282 415 4.30117 17.8498555 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 351 3.51e-92   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g10177 i0 82.143 44.5253012048193 420 65 100 8 1 415 1902 2316 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 18478 351 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1436573 1436573 PRJNA1022139_P_NODE_5922_length_534_cov_2.770065_g5818_i0 PRJNA1022139 5922 534 2.7700650000000002 14.7921471 Ripella sp. 805 1217113 Discosea other_Eukaryota 852 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g5818 i0 95.531 101.432584269663 537 16 99 8 1 533 543 11 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 54165 852 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
1436591 1436591 PRJNA1022139_P_NODE_7962_length_466_cov_4.134860_g7857_i0 PRJNA1022139 7962 466 4.13486 19.2684476 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 5.46e-51   NTclustered gi|470467440|ref|XM_004341747.1| 1257118 g7857 i0 78.035 26.9763948497854 346 72 74 4 62 405 379 36 Acanthamoeba castellanii str. Neff guanine nucleotide-binding protein beta subunit, putative (ACA1_199990), partial mRNA blastn 12571 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6539752 6539752 PRJNA1022139_P_NODE_12066_length_387_cov_1.789809_g11961_i0 PRJNA1022139 12066 387 1.789809 6.92656083 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 7.45e-49   NTclustered gi|470486807|ref|XM_004344593.1| 1257118 g11961 i0 81.496 1.57105943152455 254 45 65 2 53 305 318 66 Acanthamoeba castellanii str. Neff MC family transporter: phosphate, putative (ACA1_278610), partial mRNA blastn 608 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6539887 6539887 PRJNA1022139_P_NODE_32546_length_257_cov_1.429348_g32441_i0 PRJNA1022139 32546 257 1.429348 3.67342436 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 65.8 3e-6   NTclustered gi|470375882|ref|XM_004333185.1| 1257118 g32441 i0 91.489 3.0272373540856 47 4 18 0 211 257 231 185 Acanthamoeba castellanii str. Neff ubiquitin domain containing protein (ACA1_389410), partial mRNA blastn 778 65.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6539958 6539958 PRJNA1022139_P_NODE_40686_length_244_cov_0.859649_g40581_i0 PRJNA1022139 40686 244 0.859649 2.09754356 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 165 2.71e-36   NTclustered gi|470403960|ref|XM_004335710.1| 1257118 g40581 i0 82.888 1.80737704918033 187 28 76 4 52 236 738 554 Acanthamoeba castellanii str. Neff leucine-tRNA ligase (ACA1_018140), partial mRNA blastn 441 165 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6540024 6540024 PRJNA1022139_P_NODE_8266_length_458_cov_3.314286_g8161_i0 PRJNA1022139 8266 458 3.314286 15.17942988 Ripella platypodia 2047821 Discosea other_Eukaryota 704 0   NTclustered gi|1269228359|gb|MF683484.1| 2047821 g8161 i0 94.577 97.1921397379913 461 15 100 7 1 458 1185 1638 Ripella platypodia clone 23.4.34 18S ribosomal RNA gene, partial sequence blastn 44514 704 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
9089155 9089155 PRJNA1022139_P_NODE_1848_length_894_cov_2.261876_g1774_i0 PRJNA1022139 1848 894 2.261876 20.22117144 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 547 9.439999999999999e-151   NTclustered gi|470423206|ref|XM_004337526.1| 1257118 g1774 i0 78.043 55.0190156599553 920 167 99 26 3 894 1073 161 Acanthamoeba castellanii str. Neff 3oxoacid CoA transferase 1 isoform 3, putative (ACA1_164100), partial mRNA blastn 49187 547 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10364800 10364800 PRJNA1022139_P_NODE_22849_length_293_cov_3.977273_g22744_i0 PRJNA1022139 22849 293 3.977273 11.65340989 Ripella decalvata 2047822 Discosea other_Eukaryota 424 4.999999999999999e-114   NTclustered gi|1269228409|gb|MF683534.1| 2047822 g22744 i0 92.977 83.3037542662116 299 8 100 11 1 293 646 937 Ripella decalvata clone 26.1.45 18S ribosomal RNA gene, partial sequence blastn 24408 424 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
11640372 11640372 PRJNA1022139_P_NODE_5950_length_533_cov_2.628261_g5846_i0 PRJNA1022139 5950 533 2.628261 14.00863113 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 231 6.2599999999999985e-56   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g5846 i0 80.464 56.3395872420263 302 59 57 0 111 412 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30029 231 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14190210 14190210 PRJNA1022139_P_NODE_16832_length_336_cov_2.304183_g16727_i0 PRJNA1022139 16832 336 2.304183 7.74205488 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 239 2.27e-58   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g16727 i0 79.888 1.97916666666667 358 46 100 13 1 336 916 563 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 665 239 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15464265 15464265 PRJNA1022139_P_NODE_12413_length_382_cov_5.022654_g12308_i0 PRJNA1022139 12413 382 5.022654 19.18653828 Platyamoeba placida 3454475 Discosea other_Eukaryota 510 5e-140   NTclustered gi|33946348|gb|AY294153.1| 197527 g12308 i0 90.814 98.1806282722513 381 35 99 0 1 381 91 471 Platyamoeba placida actin mRNA, partial cds blastn 37505 510 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
15464423 15464423 PRJNA1022139_P_NODE_3393_length_682_cov_3.773399_g3293_i0 PRJNA1022139 3393 682 3.773399 25.73458118 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.28e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g3293 i0 79.235 68.0014662756598 549 104 80 8 26 569 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46377 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21838467 21838467 PRJNA1022139_P_NODE_26718_length_279_cov_0.932039_g26613_i0 PRJNA1022139 26718 279 0.932039 2.60038881 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 63.9 1.19e-5   NTclustered gi|470423488|ref|XM_004337555.1| 1257118 g26613 i0 87.273 0.681003584229391 55 7 20 0 131 185 73 19 Acanthamoeba castellanii str. Neff ribosomal protein L23, putative (ACA1_164710), partial mRNA blastn 190 63.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21838640 21838640 PRJNA1022139_P_NODE_5438_length_555_cov_3.271784_g5334_i0 PRJNA1022139 5438 555 3.271784 18.1584012 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 278 8.28e-70   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g5334 i0 84.507 22.3675675675676 284 40 51 4 227 508 302 21 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 12414 278 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;