RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1022139" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
161555 161555 PRJNA1022139_P_NODE_17301_length_333_cov_0.861538_g17196_i0 PRJNA1022139 17301 333 0.861538 2.86892154 Leptolyngbya sp. NK1-12 2547451 Bacteria Bacteria 54.7 0.009   NTclustered gi|2591950834|gb|CP053587.1| 2547451 g17196 i0 100 0.0870870870870871 29 0 9 0 152 180 316190 316218 Leptolyngbya sp. NK1-12 chromosome 2, complete sequence blastn 29 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. NK1-12
15464486 15464486 PRJNA1022139_P_NODE_43253_length_239_cov_3.307229_g43148_i0 PRJNA1022139 43253 239 3.307229 7.90427731 Geminocystis sp. NIES-3709 1617448 Bacteria Bacteria 52.8 0.021   NTclustered gi|770470343|dbj|AP014821.1| 1617448 g43148 i0 96.774 0.129707112970711 31 1 13 0 81 111 3342870 3342900 Geminocystis sp. NIES-3709 DNA, complete genome blastn 31 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Geminocystis Geminocystis sp. NIES-3709

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;