RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1022139" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7814408 7814408 PRJNA1022139_P_NODE_8327_length_457_cov_1.497396_g8222_i0 PRJNA1022139 8327 457 1.497396 6.84309972 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 52.8 0.044   NTclustered gi|2893358421|emb|OZ220713.1| 2793154 g8222 i0 96.774 0.0678336980306346 31 1 7 0 289 319 3112807 3112837 MAG: Vicinamibacteria bacterium isolate f5636fb4-303b-4095-abf0-868cc3675b90 genome assembly, chromosome: 1 blastn 31 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
24387864 24387864 PRJNA1022139_P_NODE_4160_length_625_cov_1.394928_g4056_i0 PRJNA1022139 4160 625 1.394928 8.7183 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 54.7 0.017   NTclustered gi|2621704939|emb|OY762226.1| 2910147 g4056 i0 100 0.0464 29 0 5 0 37 65 2686074 2686046 MAG: Vicinamibacterales bacterium isolate 0d5134ca-f8ab-4963-ab29-a032ed897002 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;