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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA1022139" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 22 ✖

bioproject 1

  • PRJNA1022139 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
161501 161501 PRJNA1022139_P_NODE_11821_length_391_cov_0.968553_g11716_i0 PRJNA1022139 11821 391 0.968553 3.78704223 Chlamydomonas reinhardtii 3055 Plants Plants 82.4 4.77e-11   NTclustered gi|2082265983|ref|XM_043070553.1| 3055 g11716 i0 80.357 0.286445012787724 112 18 28 4 201 310 1901 2010 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_15g637100v5), mRNA blastn 112 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
161652 161652 PRJNA1022139_P_NODE_3041_length_717_cov_6.664596_g2943_i0 PRJNA1022139 3041 717 6.664596 47.78515332 Monoraphidium neglectum 145388 Plants Plants 296 3.0000000000000004e-75   NTclustered gi|926773763|ref|XM_014039902.1| 145388 g2943 i0 78.661 33.4323570432357 478 78 65 22 252 717 489 24 Monoraphidium neglectum 60S ribosomal protein L19-2 mRNA blastn 23971 296 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
1436511 1436511 PRJNA1022139_P_NODE_38342_length_246_cov_2.132948_g38237_i0 PRJNA1022139 38342 246 2.132948 5.24705208 Chlamydomonas reinhardtii 3055 Plants Plants 141 4.61e-29   NTclustered gi|2082255178|ref|XM_043066046.1| 3055 g38237 i0 77.959 1.63008130081301 245 40 97 12 6 243 709 946 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g401886v5), mRNA blastn 401 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2711941 2711941 PRJNA1022139_P_NODE_17703_length_329_cov_2.203125_g17598_i0 PRJNA1022139 17703 329 2.203125 7.24828125 Monoraphidium neglectum 145388 Plants Plants 52.8 0.031   NTclustered gi|926789656|ref|XM_014047848.1| 145388 g17598 i0 100 0.0851063829787234 28 0 9 0 83 110 225 252 Monoraphidium neglectum hypothetical protein mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
2711973 2711973 PRJNA1022139_P_NODE_20603_length_308_cov_1.965957_g20498_i0 PRJNA1022139 20603 308 1.965957 6.05514756 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 6.18e-4   NTclustered gi|2082238366|ref|XM_043059241.1| 3055 g20498 i0 89.13 0.149350649350649 46 5 15 0 67 112 1511 1556 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g081250v5), mRNA blastn 46 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
3554140 3554140 PRJNA1022139_P_NODE_7163_length_490_cov_3.654676_g7058_i0 PRJNA1022139 7163 490 3.654676 17.9079124 Eukaryota 2759 Plants Plants 900 0   NTclustered gi|1201359271|gb|MF040793.1| 3078 g7058 i0 99.796 100.673469387755 490 1 100 0 1 490 545 56 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 49330 900 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
3988171 3988171 PRJNA1022139_P_NODE_1864_length_890_cov_6.669523_g1788_i0 PRJNA1022139 1864 890 6.669523 59.3587547 Chlamydomonas reinhardtii 3055 Plants Plants 390 1.68e-103   NTclustered gi|2082259086|ref|XM_001697336.2| 3055 g1788 i0 84.557 43.8505617977528 395 59 44 2 386 779 515 122 Chlamydomonas reinhardtii ribosomal protein S14 (CHLRE_11g480150v5), mRNA blastn 39027 390 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5264515 5264515 PRJNA1022139_P_NODE_2445_length_787_cov_7.267507_g2357_i0 PRJNA1022139 2445 787 7.267507 57.19528009 Chlamydomonas reinhardtii 3055 Plants Plants 407 1.46e-108   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g2357 i0 79.758 63.0177890724269 578 103 73 13 11 581 287 857 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 49595 407 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11206877 11206877 PRJNA1022139_P_NODE_28449_length_272_cov_2.120603_g28344_i0 PRJNA1022139 28449 272 2.120603 5.76804016 Eukaryota 2759 Plants Plants 56.5 0.002   NTclustered gi|170172425|dbj|AB363969.1| 3055 g28344 i0 90.476 1.16911764705882 42 4 15 0 106 147 2028 2069 Chlamydomonas reinhardtii ROC75 mRNA for RHYTHM OF CHLOROPLAST 75, complete cds, variant 2 blastn 318 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12915303 12915303 PRJNA1022139_P_NODE_21091_length_305_cov_1.327586_g20986_i0 PRJNA1022139 21091 305 1.327586 4.0491373 Auxenochlorella protothecoides 3075 Plants Plants 161 4.53e-35   NTclustered gi|760437580|ref|XM_011397557.1| 3075 g20986 i0 80 2.00655737704918 225 39 73 5 61 282 64 285 Auxenochlorella protothecoides Transcription factor BTF3 partial mRNA blastn 612 161 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
12915326 12915326 PRJNA1022139_P_NODE_2371_length_799_cov_4.190083_g2286_i0 PRJNA1022139 2371 799 4.190083 33.47876317 Chlamydomonas incerta 51695 Plants Plants 448 8.759999999999998e-121   NTclustered gi|74272606|gb|DQ122868.1| 51695 g2286 i0 84.464 71.9949937421777 457 67 57 4 303 757 488 34 Chlamydomonas incerta 40S ribosomal protein S3 mRNA, complete cds blastn 57524 448 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
14190154 14190154 PRJNA1022139_P_NODE_10412_length_413_cov_2.008824_g10307_i0 PRJNA1022139 10412 413 2.008824 8.29644312 Auxenochlorella pyrenoidosa 3078 Plants Plants 741 0   NTclustered gi|1201359271|gb|MF040793.1| 3078 g10307 i0 99.031 94.7917675544794 413 4 100 0 1 413 1833 1421 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 39149 741 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
14190234 14190234 PRJNA1022139_P_NODE_19752_length_314_cov_2.029046_g19647_i0 PRJNA1022139 19752 314 2.029046 6.37120444 Chlamydomonas reinhardtii 3055 Plants Plants 167 1.01e-36   NTclustered gi|18243|emb|X60826.1| 3055 g19647 i0 90.476 45.8949044585987 126 12 40 0 164 289 395 270 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) blastn 14411 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15464364 15464364 PRJNA1022139_P_NODE_2633_length_763_cov_1.736232_g2543_i0 PRJNA1022139 2633 763 1.736232 13.24745016 Chlamydomonas reinhardtii 3055 Plants Plants 241 1.52e-58   NTclustered gi|18122|emb|X61624.1| 3055 g2543 i0 79.701 28.7169069462647 335 66 44 2 21 354 1387 1720 Chlamydomonas reinhardtii atp2 (atpB) mRNA blastn 21911 241 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16738736 16738736 PRJNA1022139_P_NODE_4194_length_623_cov_1.743636_g4090_i0 PRJNA1022139 4194 623 1.743636 10.86285228 Monoraphidium neglectum 145388 Plants Plants 213 2.68e-50   NTclustered gi|926767429|ref|XM_014037313.1| 145388 g4090 i0 77.446 9.99197431781701 368 75 58 8 98 461 374 11 Monoraphidium neglectum coatomer protein complex, subunit alpha(xenin) mRNA blastn 6225 213 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
18013480 18013480 PRJNA1022139_P_NODE_27275_length_277_cov_1.132353_g27170_i0 PRJNA1022139 27275 277 1.132353 3.13661781 Chlorella variabilis 554065 Plants Plants 263 1.08e-65   NTclustered gi|552829117|ref|XM_005847563.1| 554065 g27170 i0 84.191 29.7436823104693 272 41 98 2 1 271 809 1079 Chlorella variabilis 26S proteasome AAA-ATPase subunit RPT2a (CHLNCDRAFT_56157) mRNA, complete cds blastn 8239 263 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
19287397 19287397 PRJNA1022139_P_NODE_3536_length_669_cov_13.840604_g3435_i0 PRJNA1022139 3536 669 13.840604 92.59364076 Chlamydomonas reinhardtii 3055 Plants Plants 335 5.91e-87   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g3435 i0 77.526 72.372197309417 574 117 85 11 19 586 290 857 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 48417 335 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20562929 20562929 PRJNA1022139_P_NODE_5417_length_556_cov_2.544513_g5313_i0 PRJNA1022139 5417 556 2.544513 14.14749228 Volvox carteri 3067 Plants Plants 75 1.17e-8   NTclustered gi|302834021|ref|XM_002948528.1| 3068 g5313 i0 83.333 9.33812949640288 84 11 15 1 51 134 2287 2207 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_116833), partial mRNA blastn 5192 75 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
21838634 21838634 PRJNA1022139_P_NODE_4718_length_592_cov_3.955684_g4614_i0 PRJNA1022139 4718 592 3.955684 23.41764928 Monoraphidium neglectum 145388 Plants Plants 255 4.16e-63   NTclustered gi|926778303|ref|XM_014042172.1| 145388 g4614 i0 78.019 17.9628378378378 414 85 69 5 30 440 25 435 Monoraphidium neglectum 40S ribosomal protein S18 mRNA blastn 10634 255 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
23114067 23114067 PRJNA1022139_P_NODE_5119_length_570_cov_6.004024_g5015_i0 PRJNA1022139 5119 570 6.004024 34.2229368 Monoraphidium neglectum 145388 Plants Plants 278 8.52e-70   NTclustered gi|926795717|ref|XM_014050538.1| 145388 g5015 i0 83.333 48.3578947368421 300 50 53 0 59 358 61 360 Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA blastn 27564 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
24387623 24387623 PRJNA1022139_P_NODE_11960_length_388_cov_7.653968_g11855_i0 PRJNA1022139 11960 388 7.653968 29.69739584 Chlorella variabilis 554065 Plants Plants 442 1.8799999999999992e-119   NTclustered gi|552844675|ref|XM_005851082.1| 554065 g11855 i0 92.787 77.9896907216495 305 22 79 0 84 388 86 390 Chlorella variabilis alpha-tubulin (CHLNCDRAFT_33793) mRNA, complete cds blastn 30260 442 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
24387671 24387671 PRJNA1022139_P_NODE_17480_length_331_cov_1.558140_g17375_i0 PRJNA1022139 17480 331 1.55814 5.1574434 Chlorella variabilis 554065 Plants Plants 56.5 0.002   NTclustered gi|552820926|ref|XM_005845650.1| 554065 g17375 i0 92.5 0.205438066465257 40 1 12 2 219 258 987 1024 Chlorella variabilis hypothetical protein (CHLNCDRAFT_136854) mRNA, complete cds blastn 68 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;