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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA1022139" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA1022139 · 32 ✖

analysis 1

  • blastn · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
161601 161601 PRJNA1022139_P_NODE_23241_length_291_cov_1.862385_g23136_i0 PRJNA1022139 23241 291 1.862385 5.41954035 Dictyostelium purpureum 5786 Evosea other_Eukaryota 219 2.5099999999999998e-52   NTclustered gi|330791897|ref|XM_003283980.1| 5786 g23136 i0 80.546 35.1099656357388 293 50 100 5 1 291 1351 1064 Dictyostelium purpureum 26S proteasome ATPase 2 subunit (DICPUDRAFT_96551), mRNA blastn 10217 219 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
161605 161605 PRJNA1022139_P_NODE_2381_length_797_cov_8.785912_g2296_i0 PRJNA1022139 2381 797 8.785912 70.02371864 Platyamoeba placida 3454475 Discosea other_Eukaryota 970 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g2296 i0 90.871 94.0639899623588 723 66 91 0 75 797 1182 460 Platyamoeba placida actin mRNA, partial cds blastn 74969 970 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
1003641 1003641 PRJNA1022139_P_NODE_43701_length_230_cov_2.872611_g43596_i0 PRJNA1022139 43701 230 2.872611 6.6070053 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 154 5.47e-33   NTclustered gi|330791827|ref|XM_003283945.1| 5786 g43596 i0 85.235 63.6 149 22 65 0 44 192 1258 1110 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_52641), mRNA blastn 14628 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
1436292 1436292 PRJNA1022139_P_NODE_10282_length_415_cov_4.301170_g10177_i0 PRJNA1022139 10282 415 4.30117 17.8498555 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 351 3.51e-92   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g10177 i0 82.143 44.5253012048193 420 65 100 8 1 415 1902 2316 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 18478 351 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1436573 1436573 PRJNA1022139_P_NODE_5922_length_534_cov_2.770065_g5818_i0 PRJNA1022139 5922 534 2.7700650000000002 14.7921471 Ripella sp. 805 1217113 Discosea other_Eukaryota 852 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g5818 i0 95.531 101.432584269663 537 16 99 8 1 533 543 11 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 54165 852 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
1436591 1436591 PRJNA1022139_P_NODE_7962_length_466_cov_4.134860_g7857_i0 PRJNA1022139 7962 466 4.13486 19.2684476 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 5.46e-51   NTclustered gi|470467440|ref|XM_004341747.1| 1257118 g7857 i0 78.035 26.9763948497854 346 72 74 4 62 405 379 36 Acanthamoeba castellanii str. Neff guanine nucleotide-binding protein beta subunit, putative (ACA1_199990), partial mRNA blastn 12571 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3988332 3988332 PRJNA1022139_P_NODE_39544_length_245_cov_0.895349_g39439_i0 PRJNA1022139 39544 245 0.895349 2.19360505 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|66823122|ref|XM_639824.1| 352472 g39439 i0 100 0.628571428571429 29 0 12 0 145 173 1711 1683 Dictyostelium discoideum AX4 RhoGAP domain-containing protein (gacU) mRNA, complete cds blastn 154 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
4831580 4831580 PRJNA1022139_P_NODE_14144_length_362_cov_1.598616_g14039_i0 PRJNA1022139 14144 362 1.598616 5.78698992 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 7.38e-4   NTclustered gi|330791506|ref|XM_003283786.1| 5786 g14039 i0 92.5 1.36740331491713 40 3 11 0 203 242 6288 6327 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_45096), partial mRNA blastn 495 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
6539752 6539752 PRJNA1022139_P_NODE_12066_length_387_cov_1.789809_g11961_i0 PRJNA1022139 12066 387 1.789809 6.92656083 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 7.45e-49   NTclustered gi|470486807|ref|XM_004344593.1| 1257118 g11961 i0 81.496 1.57105943152455 254 45 65 2 53 305 318 66 Acanthamoeba castellanii str. Neff MC family transporter: phosphate, putative (ACA1_278610), partial mRNA blastn 608 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6539887 6539887 PRJNA1022139_P_NODE_32546_length_257_cov_1.429348_g32441_i0 PRJNA1022139 32546 257 1.429348 3.67342436 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 65.8 3e-6   NTclustered gi|470375882|ref|XM_004333185.1| 1257118 g32441 i0 91.489 3.0272373540856 47 4 18 0 211 257 231 185 Acanthamoeba castellanii str. Neff ubiquitin domain containing protein (ACA1_389410), partial mRNA blastn 778 65.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6539934 6539934 PRJNA1022139_P_NODE_37906_length_247_cov_0.885057_g37801_i0 PRJNA1022139 37906 247 0.885057 2.18609079 Physarum polycephalum 5791 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|19570867|dbj|AB049419.1| 5791 g37801 i0 100 0.34412955465587 29 0 12 0 158 186 575 547 Physarum polycephalum Glom mRNA for mitochondrial DNA packaging protein, complete cds blastn 85 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
6539958 6539958 PRJNA1022139_P_NODE_40686_length_244_cov_0.859649_g40581_i0 PRJNA1022139 40686 244 0.859649 2.09754356 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 165 2.71e-36   NTclustered gi|470403960|ref|XM_004335710.1| 1257118 g40581 i0 82.888 1.80737704918033 187 28 76 4 52 236 738 554 Acanthamoeba castellanii str. Neff leucine-tRNA ligase (ACA1_018140), partial mRNA blastn 441 165 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6540024 6540024 PRJNA1022139_P_NODE_8266_length_458_cov_3.314286_g8161_i0 PRJNA1022139 8266 458 3.314286 15.17942988 Ripella platypodia 2047821 Discosea other_Eukaryota 704 0   NTclustered gi|1269228359|gb|MF683484.1| 2047821 g8161 i0 94.577 97.1921397379913 461 15 100 7 1 458 1185 1638 Ripella platypodia clone 23.4.34 18S ribosomal RNA gene, partial sequence blastn 44514 704 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
9089111 9089111 PRJNA1022139_P_NODE_12648_length_380_cov_1.130293_g12543_i0 PRJNA1022139 12648 380 1.130293 4.2951134 Acytostelium subglobosum 361139 Evosea other_Eukaryota 250 1.2e-61   NTclustered gi|831769224|ref|XM_012897186.1| 1410327 g12543 i0 78.701 9.14210526315789 385 75 100 5 1 380 541 159 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 3474 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
9089155 9089155 PRJNA1022139_P_NODE_1848_length_894_cov_2.261876_g1774_i0 PRJNA1022139 1848 894 2.261876 20.22117144 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 547 9.439999999999999e-151   NTclustered gi|470423206|ref|XM_004337526.1| 1257118 g1774 i0 78.043 55.0190156599553 920 167 99 26 3 894 1073 161 Acanthamoeba castellanii str. Neff 3oxoacid CoA transferase 1 isoform 3, putative (ACA1_164100), partial mRNA blastn 49187 547 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10364800 10364800 PRJNA1022139_P_NODE_22849_length_293_cov_3.977273_g22744_i0 PRJNA1022139 22849 293 3.977273 11.65340989 Ripella decalvata 2047822 Discosea other_Eukaryota 424 4.999999999999999e-114   NTclustered gi|1269228409|gb|MF683534.1| 2047822 g22744 i0 92.977 83.3037542662116 299 8 100 11 1 293 646 937 Ripella decalvata clone 26.1.45 18S ribosomal RNA gene, partial sequence blastn 24408 424 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
11640372 11640372 PRJNA1022139_P_NODE_5950_length_533_cov_2.628261_g5846_i0 PRJNA1022139 5950 533 2.628261 14.00863113 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 231 6.2599999999999985e-56   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g5846 i0 80.464 56.3395872420263 302 59 57 0 111 412 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30029 231 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12915320 12915320 PRJNA1022139_P_NODE_22611_length_295_cov_1.585586_g22506_i0 PRJNA1022139 22611 295 1.585586 4.6774787 Acytostelium subglobosum 361139 Evosea other_Eukaryota 87.9 7.51e-13   NTclustered gi|831788452|ref|XM_012903297.1| 1410327 g22506 i0 89.706 0.230508474576271 68 7 23 0 94 161 1840 1907 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 68 87.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
14190210 14190210 PRJNA1022139_P_NODE_16832_length_336_cov_2.304183_g16727_i0 PRJNA1022139 16832 336 2.304183 7.74205488 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 239 2.27e-58   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g16727 i0 79.888 1.97916666666667 358 46 100 13 1 336 916 563 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 665 239 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15031284 15031284 PRJNA1022139_P_NODE_10232_length_416_cov_7.002915_g10127_i0 PRJNA1022139 10232 416 7.002915 29.1321264 Dictyostelium 5782 Evosea other_Eukaryota 255 2.84e-63   NTclustered gi|167938|gb|M23749.1|DDIUBIQB 44689 g10127 i0 79.944 73.4254807692308 359 63 86 9 3 358 33 385 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV45 blastn 30545 255 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
15464265 15464265 PRJNA1022139_P_NODE_12413_length_382_cov_5.022654_g12308_i0 PRJNA1022139 12413 382 5.022654 19.18653828 Platyamoeba placida 3454475 Discosea other_Eukaryota 510 5e-140   NTclustered gi|33946348|gb|AY294153.1| 197527 g12308 i0 90.814 98.1806282722513 381 35 99 0 1 381 91 471 Platyamoeba placida actin mRNA, partial cds blastn 37505 510 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
15464366 15464366 PRJNA1022139_P_NODE_27093_length_277_cov_1.720588_g26988_i0 PRJNA1022139 27093 277 1.720588 4.76602876 Cavenderia fasciculata 261658 Evosea other_Eukaryota 82.4 3.25e-11   NTclustered gi|470262764|ref|XM_004360714.1| 261658 g26988 i0 90.323 6.86642599277978 62 6 22 0 123 184 258 197 Cavenderia fasciculata uncharacterized protein (DFA_05050), partial mRNA blastn 1902 82.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
15464423 15464423 PRJNA1022139_P_NODE_3393_length_682_cov_3.773399_g3293_i0 PRJNA1022139 3393 682 3.773399 25.73458118 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.28e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g3293 i0 79.235 68.0014662756598 549 104 80 8 26 569 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46377 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15464450 15464450 PRJNA1022139_P_NODE_3753_length_651_cov_2.356401_g3649_i0 PRJNA1022139 3753 651 2.356401 15.34017051 Cavenderia fasciculata 261658 Evosea other_Eukaryota 320 1.61e-82   NTclustered gi|470266348|ref|XM_004361672.1| 261658 g3649 i0 79.642 18.2718894009217 447 89 69 2 2 447 328 773 Cavenderia fasciculata Rab GTPase (rab7A), partial mRNA blastn 11895 320 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
15464518 15464518 PRJNA1022139_P_NODE_7133_length_491_cov_2.966507_g7028_i0 PRJNA1022139 7133 491 2.966507 14.56554937 Dictyostelium purpureum 5786 Evosea other_Eukaryota 73.1 3.68e-8   NTclustered gi|330790854|ref|XM_003283463.1| 5786 g7028 i0 76.19 0.378818737270876 147 29 30 4 269 415 392 252 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_93471), partial mRNA blastn 186 73.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
16306009 16306009 PRJNA1022139_P_NODE_14133_length_362_cov_1.847751_g14028_i0 PRJNA1022139 14133 362 1.847751 6.68885862 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 329 1.42e-85   NTclustered gi|330792727|ref|XM_003284391.1| 5786 g14028 i0 84.848 92.2430939226519 330 46 91 4 1 328 75 402 Dictyostelium purpureum elongation factor 1 alpha (DICPUDRAFT_52946), mRNA blastn 33392 331 0.993957703927492 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18013449 18013449 PRJNA1022139_P_NODE_23955_length_288_cov_2.506977_g23850_i0 PRJNA1022139 23955 288 2.506977 7.22009376 Dictyostelium purpureum 5786 Evosea other_Eukaryota 52.8 0.027   NTclustered gi|330845282|ref|XM_003294474.1| 5786 g23850 i0 100 0.0972222222222222 28 0 10 0 247 274 142 115 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_159528), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18013468 18013468 PRJNA1022139_P_NODE_26415_length_280_cov_1.159420_g26310_i0 PRJNA1022139 26415 280 1.15942 3.246376 Acytostelium subglobosum 361139 Evosea other_Eukaryota 167 8.83e-37   NTclustered gi|831768525|ref|XM_012896976.1| 1410327 g26310 i0 77.899 1.98214285714286 276 55 98 3 7 279 921 649 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 555 167 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
19287210 19287210 PRJNA1022139_P_NODE_11116_length_401_cov_2.743902_g11011_i0 PRJNA1022139 11116 401 2.743902 11.00304702 Dictyostelium purpureum 5786 Evosea other_Eukaryota 287 9.68e-73   NTclustered gi|330822624|ref|XM_003291701.1| 5786 g11011 i0 80 22.9551122194514 395 73 98 4 10 401 261 652 Dictyostelium purpureum vacuolar H+ ATPase B subunit (DICPUDRAFT_50012), mRNA blastn 9205 287 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21838452 21838452 PRJNA1022139_P_NODE_24058_length_288_cov_1.432558_g23953_i0 PRJNA1022139 24058 288 1.432558 4.12576704 Fuligo septica 159720 Evosea other_Eukaryota 220 6.8999999999999985e-53   NTclustered gi|2329703162|gb|MW239946.1| 647295 g23953 i0 80.208 19.2708333333333 288 53 99 4 1 286 72 357 Fuligo septica var. flava strain MA-Fungi 78792 alpha tubulin (aTUB) gene, partial cds blastn 5550 220 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
21838467 21838467 PRJNA1022139_P_NODE_26718_length_279_cov_0.932039_g26613_i0 PRJNA1022139 26718 279 0.932039 2.60038881 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 63.9 1.19e-5   NTclustered gi|470423488|ref|XM_004337555.1| 1257118 g26613 i0 87.273 0.681003584229391 55 7 20 0 131 185 73 19 Acanthamoeba castellanii str. Neff ribosomal protein L23, putative (ACA1_164710), partial mRNA blastn 190 63.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21838640 21838640 PRJNA1022139_P_NODE_5438_length_555_cov_3.271784_g5334_i0 PRJNA1022139 5438 555 3.271784 18.1584012 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 278 8.28e-70   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g5334 i0 84.507 22.3675675675676 284 40 51 4 227 508 302 21 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 12414 278 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;