RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1020854" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1020854 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6106363 6106363 PRJNA1020854_S_NODE_17865_length_266_cov_1573.514768_g15101_i0 PRJNA1020854 17865 266 1573.514768 4185.54928288 Fungi 4751 Fungi Fungi 331 2.7900000000000003e-86   NTclustered gi|658131632|emb|HF968958.1| 4874 g15101 i0 98.919 167.353383458647 185 2 70 0 56 240 2002 2186 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 44516 331 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
11206622 11206622 PRJNA1020854_S_NODE_31589_length_182_cov_147.222222_g28825_i0 PRJNA1020854 31589 182 147.222222 267.94444404 Eukaryota 2759 Fungi Fungi 198 1.88e-46   NTclustered gi|168378|gb|M26190.1|MRARRHA 4841 g28825 i0 99.099 63.5274725274725 111 0 60 1 73 182 2327 2437 M.racemosus (Zygomycetes) 25S ribosomal RNA gene blastn 11562 200 0.99 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
18013005 18013005 PRJNA1020854_S_NODE_41175_length_155_cov_1.920635_g38411_i0 PRJNA1020854 41175 155 1.920635 2.97698425 Mucor mucedo 29922 Fungi Fungi 243 7.05e-60   NTclustered gi|2324041452|ref|XM_051600277.1| 29922 g38411 i0 94.839 5.96774193548387 155 8 100 0 1 155 388 542 Mucor mucedo ribosomal protein L13e (EV154DRAFT_497516), mRNA blastn 925 243 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
24386898 24386898 PRJNA1020854_S_NODE_19580_length_250_cov_5.674208_g16816_i0 PRJNA1020854 19580 250 5.674208 14.18552 Gamsiella multidivaricata 101098 Fungi Fungi 344 3.34e-90   NTclustered gi|2323765961|ref|XM_051559822.1| 101098 g16816 i0 95.775 13.656 213 9 85 0 13 225 61 273 Gamsiella multidivaricata ribosomal protein S28e-domain-containing protein (BC939DRAFT_498477), partial mRNA blastn 3414 344 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;