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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA1020854" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJNA1020854 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1435533 1435533 PRJNA1020854_S_NODE_15742_length_292_cov_19.414449_g12978_i0 PRJNA1020854 15742 292 19.414449 56.69019108 uncultured haptorid ciliate 282486 SAR_Eukaryotes SAR_Eukaryotes 429 1.07e-115   NTclustered gi|2006880526|emb|HG995482.1| 282486 g12978 i0 93.174 100.513698630137 293 18 100 2 1 292 726 435 uncultured haptorid ciliate genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, clone 05109c93 blastn 29350 429 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida     uncultured haptorid ciliate
2711708 2711708 PRJNA1020854_S_NODE_7883_length_521_cov_4.191057_g5239_i0 PRJNA1020854 7883 521 4.191057 21.83540697 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 881 0   NTclustered gi|166046642|emb|CU367759.1| 100861 g5239 i0 99.792 17.5067178502879 480 1 92 0 22 501 190 669 Aphanomyces euteiches cDNA blastn 9121 881 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
4831418 4831418 PRJNA1020854_S_NODE_37464_length_164_cov_2.540741_g34700_i0 PRJNA1020854 37464 164 2.540741 4.16681524 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 124 2.86e-24   NTclustered gi|126142828|gb|EF070284.1| 5898 g34700 i0 80.488 21.7560975609756 164 30 99 2 2 164 1629 1791 Tetrahymena furgasoni strain GL(amicronucleate) cytochrome oxidase subunit I (cox1) gene, partial cds; mitochondrial blastn 3568 124 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena furgasoni
7813305 7813305 PRJNA1020854_S_NODE_15367_length_297_cov_1331.608209_g12603_i0 PRJNA1020854 15367 297 1331.608209 3954.87638073 Synura glabra 52553 SAR_Eukaryotes SAR_Eukaryotes 357 5.22e-94   NTclustered gi|859809332|gb|KM590638.1| 52553 g12603 i0 94.068 69.4680134680135 236 12 79 2 54 288 147 381 Synura glabra strain Jakeunmeok052407B 26S ribosomal RNA gene, partial sequence blastn 20632 357 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura glabra
9088356 9088356 PRJNA1020854_S_NODE_18968_length_255_cov_1438.150442_g16204_i0 PRJNA1020854 18968 255 1438.150442 3667.2836271 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 366 7.28e-97   NTclustered gi|820695469|tpe|LN714488.1| 572307 g16204 i0 100 180.6 198 0 78 0 1 198 157188 157385 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 46053 366 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
9931159 9931159 PRJNA1020854_S_NODE_15008_length_302_cov_70.329670_g12244_i0 PRJNA1020854 15008 302 70.32967 212.3956034 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 401 2.4199999999999994e-107   NTclustered gi|300713466|gb|GQ902928.1| 152704 g12244 i0 93.68 71.7582781456954 269 15 89 2 23 290 73 340 Uncultured stramenopile clone Ac-C2 28S ribosomal RNA gene, partial sequence blastn 21671 401 1 Eukaryota Sar             uncultured stramenopile
10363970 10363970 PRJNA1020854_S_NODE_18169_length_263_cov_17.833333_g15405_i0 PRJNA1020854 18169 263 17.833333 46.90166579 Halodinium verrucatum 2448773 SAR_Eukaryotes SAR_Eukaryotes 244 3.69e-60   NTclustered gi|1489895921|dbj|LC424402.1| 2448773 g15405 i0 86.818 56.9087452471483 220 27 83 2 12 230 219 1 Halodinium verrucatum KC36_KC37 gene for 28S ribosomal RNA, partial sequence blastn 14967 244 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida   Halodinium Halodinium verrucatum
11639352 11639352 PRJNA1020854_S_NODE_16890_length_278_cov_3.433735_g14126_i0 PRJNA1020854 16890 278 3.433735 9.5457833 Blastocystis hominis 12968 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|855314860|ref|XM_013043203.1| 12968 g14126 i0 96.875 0.115107913669065 32 0 11 1 131 161 1929 1960 Blastocystis hominis mRNA blastn 32 52.8 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
13756742 13756742 PRJNA1020854_S_NODE_30531_length_186_cov_18.369427_g27767_i0 PRJNA1020854 30531 186 18.369427 34.16713422 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 300 5.1400000000000004e-77   NTclustered gi|115353907|gb|DQ868347.1| 77619 g27767 i0 99.394 89.1021505376344 165 1 89 0 22 186 610 774 Vorticella microstoma 18S small subunit ribosomal RNA gene, partial sequence blastn 16573 300 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella microstoma
18012535 18012535 PRJNA1020854_S_NODE_16655_length_280_cov_2203.111554_g13891_i0 PRJNA1020854 16655 280 2203.111554 6168.7123512 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 309 1.39e-79   NTclustered gi|820695469|tpe|LN714488.1| 572307 g13891 i0 90.909 170.392857142857 231 20 83 1 1 230 300541 300771 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 47710 309 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
18013168 18013168 PRJNA1020854_S_NODE_7915_length_518_cov_1089.292434_g5269_i0 PRJNA1020854 7915 518 1089.292434 5642.53480812 Opisthonecta sp. FG-2015 1607889 SAR_Eukaryotes SAR_Eukaryotes 765 0   NTclustered gi|759083562|gb|KM222179.1| 1607889 g5269 i0 98.611 80.6563706563707 432 6 83 0 10 441 432 1 Opisthonecta sp. FG-2015 voucher SZ2011052301 large subunit ribosomal RNA gene, partial sequence blastn 41780 765 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta sp. FG-2015
18854959 18854959 PRJNA1020854_S_NODE_27275_length_200_cov_15.625731_g24511_i0 PRJNA1020854 27275 200 15.625731 31.251462 root 1 Root_unresolved Root_unresolved 327 2.58e-85   NTclustered gi|10832|emb|X54512.1| 5911 g24511 i0 100 91.375 177 0 89 0 24 200 8294 8118 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 18275 327 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23955509 23955509 PRJNA1020854_S_NODE_18639_length_258_cov_2342.532751_g15875_i0 PRJNA1020854 18639 258 2342.532751 6043.73449758 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 211 3.66e-50   NTclustered gi|13236232|gb|AF318234.1| 2935 g15875 i0 85.507 67.5426356589147 207 24 79 5 55 258 118 321 Alexandrium insuetum 24S large subunit ribosomal RNA pseudogene, partial sequence blastn 17426 211 1 Eukaryota Sar     Dinophyceae Gonyaulacales Pyrocystaceae Alexandrium Alexandrium insuetum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;