contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA1020854" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161307 | 161307 | PRJNA1020854_S_NODE_7521_length_547_cov_1040.063707_g4899_i0 | PRJNA1020854 | 7521 | 547 | 1040.063707 | 5689.14847729 | Singulisphaera sp. Ch08 | 3120278 | Bacteria | Bacteria | 599 | 1.53e-166 | NTclustered | gi|2732846650|gb|CP155447.1| | 3120278 | g4899 | i0 | 88.431 | 54.617915904936 | 510 | 41 | 91 | 16 | 1 | 500 | 7728938 | 7728437 | Singulisphaera sp. Ch08 chromosome, complete genome | blastn | 29876 | 599 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera sp. Ch08 | |
| 1435730 | 1435730 | PRJNA1020854_S_NODE_26282_length_205_cov_7.465909_g23518_i0 | PRJNA1020854 | 26282 | 205 | 7.465909 | 15.30511345 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 316 | 5.75e-82 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g23518 | i0 | 94.634 | 36.7121951219512 | 205 | 10 | 100 | 1 | 1 | 205 | 2834516 | 2834313 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 7526 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 2710971 | 2710971 | PRJNA1020854_S_NODE_11143_length_379_cov_62.034286_g8391_i0 | PRJNA1020854 | 11143 | 379 | 62.034286 | 235.10994394 | uncultured Verrucomicrobium sp. | 114704 | Bacteria | Bacteria | 462 | 1.4099999999999999e-125 | NTclustered | gi|296172422|emb|FN668204.2| | 114704 | g8391 | i0 | 97.091 | 68.1187335092348 | 275 | 7 | 72 | 1 | 106 | 379 | 451 | 725 | Uncultured Verrucomicrobium sp. partial 16S rRNA gene, clone ZS-4-361 | blastn | 25817 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | uncultured Verrucomicrobium sp. | |
| 3987798 | 3987798 | PRJNA1020854_S_NODE_42724_length_151_cov_14.959016_g39960_i0 | PRJNA1020854 | 42724 | 151 | 14.959016 | 22.58811416 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 263 | 5.23e-66 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g39960 | i0 | 98.013 | 17.3973509933775 | 151 | 3 | 100 | 0 | 1 | 151 | 2497266 | 2497116 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 2627 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 4831346 | 4831346 | PRJNA1020854_S_NODE_30284_length_187_cov_7.000000_g27520_i0 | PRJNA1020854 | 30284 | 187 | 7 | 13.09 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 283 | 5.209999999999999e-72 | NTclustered | gi|470483113|ref|NR_076574.1| | 107709 | g27520 | i0 | 98.148 | 31.5828877005348 | 162 | 3 | 87 | 0 | 1 | 162 | 944 | 783 | Opitutus terrae strain PB90-1 23S ribosomal RNA gene, complete sequence | blastn | 5906 | 283 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 5264202 | 5264202 | PRJNA1020854_S_NODE_7565_length_544_cov_1035.833010_g4941_i0 | PRJNA1020854 | 7565 | 544 | 1035.83301 | 5634.9315744 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 547 | 5.599999999999998e-151 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g4941 | i0 | 87.5 | 97.2628676470588 | 480 | 53 | 88 | 6 | 18 | 494 | 693 | 218 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 52911 | 547 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 9088364 | 9088364 | PRJNA1020854_S_NODE_19348_length_252_cov_6.089686_g16584_i0 | PRJNA1020854 | 19348 | 252 | 6.089686 | 15.34600872 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 438 | 1.5e-118 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g16584 | i0 | 98.016 | 76.5436507936508 | 252 | 5 | 100 | 0 | 1 | 252 | 2833844 | 2834095 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 19289 | 438 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 9088617 | 9088617 | PRJNA1020854_S_NODE_32328_length_180_cov_2.417219_g29564_i0 | PRJNA1020854 | 32328 | 180 | 2.417219 | 4.3509942 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 62.1 | 2.54e-5 | NTclustered | gi|2916415364|gb|CP170459.1| | 2026799 | g29564 | i0 | 92.857 | 0.233333333333333 | 42 | 3 | 23 | 0 | 1 | 42 | 4677726 | 4677767 | MAG: Verrucomicrobiota bacterium isolate tig00002468 chromosome, complete genome | blastn | 42 | 62.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 9088629 | 9088629 | PRJNA1020854_S_NODE_32908_length_178_cov_2.442953_g30144_i0 | PRJNA1020854 | 32908 | 178 | 2.442953 | 4.34845634 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 200 | 5.08e-47 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g30144 | i0 | 87.006 | 0.99438202247191 | 177 | 23 | 99 | 0 | 1 | 177 | 5920133 | 5919957 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 177 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 9088768 | 9088768 | PRJNA1020854_S_NODE_41628_length_154_cov_2.240000_g38864_i0 | PRJNA1020854 | 41628 | 154 | 2.24 | 3.4496000000000002 | Aureliella helgolandensis | 2527968 | Bacteria | Bacteria | 130 | 5.68e-26 | NTclustered | gi|1712701923|gb|CP036298.1| | 2527968 | g38864 | i0 | 98.63 | 1.26623376623377 | 73 | 1 | 47 | 0 | 7 | 79 | 5554640 | 5554568 | Aureliella helgolandensis strain Q31a chromosome, complete genome | blastn | 195 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Aureliella | Aureliella helgolandensis | |
| 10364595 | 10364595 | PRJNA1020854_S_NODE_9889_length_418_cov_3.796915_g7159_i0 | PRJNA1020854 | 9889 | 418 | 3.796915 | 15.8711047 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 673 | 0 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g7159 | i0 | 95.694 | 207.538277511962 | 418 | 18 | 100 | 0 | 1 | 418 | 1830937 | 1830520 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 86751 | 673 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 12914489 | 12914489 | PRJNA1020854_S_NODE_20151_length_245_cov_912.379630_g17387_i0 | PRJNA1020854 | 20151 | 245 | 912.37963 | 2235.3300935 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 257 | 4.37e-64 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g17387 | i0 | 89.372 | 65.7795918367347 | 207 | 19 | 84 | 3 | 40 | 245 | 1831413 | 1831209 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 16116 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 12914620 | 12914620 | PRJNA1020854_S_NODE_25951_length_207_cov_3.707865_g23187_i0 | PRJNA1020854 | 25951 | 207 | 3.707865 | 7.67528055 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 333 | 5.779999999999999e-87 | NTclustered | gi|2874253793|emb|OY969777.1| | 412056 | g23187 | i0 | 95.673 | 36.8743961352657 | 208 | 7 | 100 | 2 | 1 | 207 | 2364784 | 2364990 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 | blastn | 7633 | 333 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14189812 | 14189812 | PRJNA1020854_S_NODE_39472_length_159_cov_1.938462_g36708_i0 | PRJNA1020854 | 39472 | 159 | 1.938462 | 3.08215458 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 147 | 5.869999999999999e-31 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g36708 | i0 | 86.466 | 2.42138364779874 | 133 | 18 | 84 | 0 | 1 | 133 | 1722194 | 1722326 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 385 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 15030851 | 15030851 | PRJNA1020854_S_NODE_15572_length_294_cov_1159.800000_g12808_i0 | PRJNA1020854 | 15572 | 294 | 1159.8 | 3409.812 | Pirellulaceae | 2691357 | Bacteria | Bacteria | 241 | 5.42e-59 | NTclustered | gi|1015448679|gb|CP011272.1| | 1632865 | g12808 | i0 | 85.47 | 368.15306122449 | 234 | 31 | 79 | 3 | 56 | 288 | 3097757 | 3097526 | Pirellula sp. SH-Sr6A, complete genome | blastn | 108237 | 241 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. SH-Sr6A | |
| 15463318 | 15463318 | PRJNA1020854_S_NODE_10113_length_410_cov_526.167979_g7377_i0 | PRJNA1020854 | 10113 | 410 | 526.167979 | 2157.2887139 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 520 | 8.979999999999998e-143 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g7377 | i0 | 93.466 | 467.936585365854 | 352 | 20 | 85 | 3 | 62 | 410 | 1831263 | 1830912 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 191854 | 520 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 15463528 | 15463528 | PRJNA1020854_S_NODE_19313_length_252_cov_2328.807175_g16549_i0 | PRJNA1020854 | 19313 | 252 | 2328.807175 | 5868.594081 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 250 | 7.55e-62 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g16549 | i0 | 93.064 | 412.777777777778 | 173 | 9 | 68 | 2 | 55 | 225 | 2833210 | 2833381 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 104020 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 16737597 | 16737597 | PRJNA1020854_S_NODE_12414_length_348_cov_971.579937_g9650_i0 | PRJNA1020854 | 12414 | 348 | 971.579937 | 3381.09818076 | Verrucomicrobia bacterium IMCC26134 | 1637999 | Bacteria | Bacteria | 333 | 1.05e-86 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g9650 | i0 | 86.842 | 137.827586206897 | 304 | 32 | 86 | 5 | 1 | 300 | 1903093 | 1902794 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 47964 | 333 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 16737880 | 16737880 | PRJNA1020854_S_NODE_25314_length_210_cov_13.977901_g22550_i0 | PRJNA1020854 | 25314 | 210 | 13.977901 | 29.3535921 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 335 | 1.6299999999999994e-87 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g22550 | i0 | 95.673 | 26.4761904761905 | 208 | 9 | 99 | 0 | 3 | 210 | 2450 | 2243 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 5560 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 16738173 | 16738173 | PRJNA1020854_S_NODE_41594_length_154_cov_2.408000_g38830_i0 | PRJNA1020854 | 41594 | 154 | 2.408 | 3.70832 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 250 | 4.18e-62 | NTclustered | gi|2874253793|emb|OY969777.1| | 412056 | g38830 | i0 | 96.104 | 38.1363636363636 | 154 | 5 | 100 | 1 | 1 | 154 | 2365569 | 2365417 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 | blastn | 5873 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18012541 | 18012541 | PRJNA1020854_S_NODE_16935_length_277_cov_5.705645_g14171_i0 | PRJNA1020854 | 16935 | 277 | 5.705645 | 15.80463665 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 457 | 4.62e-124 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g14171 | i0 | 96.403 | 27.9819494584838 | 278 | 9 | 100 | 1 | 1 | 277 | 2834757 | 2834480 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 7751 | 457 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 20129806 | 20129806 | PRJNA1020854_S_NODE_39216_length_159_cov_4.338462_g36452_i0 | PRJNA1020854 | 39216 | 159 | 4.338462 | 6.89815458 | root | 1 | Root_unresolved | Root_unresolved | 231 | 1.58e-56 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g36452 | i0 | 93.082 | 12.5157232704403 | 159 | 9 | 100 | 2 | 1 | 159 | 1830336 | 1830492 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 1990 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 21405201 | 21405201 | PRJNA1020854_S_NODE_13977_length_319_cov_3.993103_g11213_i0 | PRJNA1020854 | 13977 | 319 | 3.993103 | 12.73799857 | Bacteria | 2 | Bacteria | Bacteria | 331 | 3.43e-86 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g11213 | i0 | 85.804 | 242.46394984326 | 317 | 40 | 99 | 5 | 5 | 319 | 27751 | 28064 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 77346 | 331 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 23113213 | 23113213 | PRJNA1020854_S_NODE_25519_length_209_cov_6.238889_g22755_i0 | PRJNA1020854 | 25519 | 209 | 6.238889 | 13.03927801 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 209 | 1.03e-49 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g22755 | i0 | 84.834 | 246.55980861244 | 211 | 28 | 100 | 3 | 1 | 209 | 2634 | 2426 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 51531 | 209 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 24386768 | 24386768 | PRJNA1020854_S_NODE_13640_length_324_cov_666.728814_g10876_i0 | PRJNA1020854 | 13640 | 324 | 666.72881400000006 | 2160.20135736 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 292 | 1.65e-74 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g10876 | i0 | 86.296 | 107.595679012346 | 270 | 36 | 83 | 1 | 7 | 275 | 2562350 | 2562619 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 34861 | 292 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;