RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1020854" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA1020854 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7380776 7380776 PRJNA1020854_S_NODE_15946_length_290_cov_3.149425_g13182_i0 PRJNA1020854 15946 290 3.149425 9.1333325 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 121 7.26e-23   NTclustered gi|2414483|emb|Y00055.1| 5656 g13182 i0 92.771 31.8724137931034 83 6 29 0 6 88 7478 7396 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 9243 121 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
21837729 21837729 PRJNA1020854_S_NODE_24278_length_216_cov_2942.331551_g21514_i0 PRJNA1020854 24278 216 2942.331551 6355.43615016 Ophirina amphinema 2108040 Root_unresolved Root_unresolved 134 6.62e-27   NTclustered gi|1464100262|dbj|LC369600.1| 2108040 g21514 i0 90.196 200.671296296296 102 10 47 0 20 121 1568 1467 Ophirina amphinema JB mitochondrial DNA, complete genome blastn 43345 134 1 Eukaryota Discoba       Jakobida Ophirinidae Ophirina Ophirina amphinema

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;