RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1020641" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA1020641 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
160541 160541 PRJNA1020641_P_NODE_7241_length_242_cov_0.911243_g7198_i0 PRJNA1020641 7241 242 0.911243 2.20520806 Microviridae sp. 2202644 Viruses Viruses 255 1.55e-63   NTclustered gi|2636863624|gb|OR406161.1| 2202644 g7198 i0 85.833 10.4834710743802 240 34 99 0 3 242 581 342 MAG: Microviridae sp. isolate sichuanganzi91-4207 genomic sequence blastn 2537 255 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.
160542 160542 PRJNA1020641_P_NODE_7381_length_241_cov_0.916667_g7338_i0 PRJNA1020641 7381 241 0.916667 2.20916747 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 0.006   NTclustered gi|2059962505|tpg|BK025468.1| 2832643 g7338 i0 100 0.120331950207469 29 0 12 0 94 122 4012 4040 MAG TPA_asm: Caudoviricetes sp. isolate ctKXC27, partial genome blastn 29 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12481871 12481871 PRJNA1020641_P_NODE_6710_length_245_cov_0.895349_g6667_i0 PRJNA1020641 6710 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 453 5.1900000000000006e-123   NTclustered gi|2915019340|gb|OR222551.1| 2832643 g6667 i0 100 9.03265306122449 245 0 100 0 1 245 43367 43611 MAG: Caudoviricetes sp. isolate MSP0382 genomic sequence blastn 2213 453 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12914275 12914275 PRJNA1020641_P_NODE_5671_length_251_cov_0.865169_g5628_i0 PRJNA1020641 5671 251 0.865169 2.17157419 Caudoviricetes sp. 2832643 Viruses Viruses 89.8 1.73e-13   NTclustered gi|2054753664|tpg|BK043470.1| 2832643 g5628 i0 77.654 2.78486055776892 179 18 71 17 66 242 58699 58857 MAG TPA_asm: Caudoviricetes sp. isolate ctgMN8, partial genome blastn 699 89.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19286251 19286251 PRJNA1020641_P_NODE_2936_length_357_cov_1.355634_g2893_i0 PRJNA1020641 2936 357 1.355634 4.83961338 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.034   NTclustered gi|2056890597|tpg|BK053686.1| 2832643 g2893 i0 100 0.0784313725490196 28 0 8 0 270 297 11192 11219 MAG TPA_asm: Caudoviricetes sp. isolate ctzlr50, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21405116 21405116 PRJNA1020641_P_NODE_6117_length_248_cov_0.880000_g6074_i0 PRJNA1020641 6117 248 0.88 2.1824 Viruses 10239 Viruses Viruses 119 2.18e-22   NTclustered gi|2295195074|gb|OP074141.1| 38018 g6074 i0 83.846 1.63306451612903 130 15 51 5 72 198 41960 41834 MAG: Bacteriophage sp. isolate 1708_88247, complete genome blastn 405 119 1 Viruses               Bacteriophage sp.
23112860 23112860 PRJNA1020641_P_NODE_2759_length_368_cov_1.305085_g2716_i0 PRJNA1020641 2759 368 1.305085 4.8027128 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 556 6.08e-154   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g2716 i0 94.005 0.997282608695652 367 22 99 0 2 368 6637 6271 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 367 556 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;