RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1020641" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1020641 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1003063 1003063 PRJNA1020641_P_NODE_7461_length_241_cov_0.916667_g7418_i0 PRJNA1020641 7461 241 0.916667 2.20916747 root 1 Root_unresolved Root_unresolved 446 8.519999999999999e-121   NTclustered gi|1280049812|gb|MF072571.1| 29917 g7418 i0 100 100 241 0 100 0 1 241 62 302 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 24100 446 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
3987147 3987147 PRJNA1020641_P_NODE_5304_length_257_cov_1.146739_g5261_i0 PRJNA1020641 5304 257 1.146739 2.94711923 Stenella araguata 93486 Fungi Fungi 449 7.1e-122   NTclustered gi|283827943|gb|EU019250.2| 93486 g5261 i0 98.431 87.2295719844358 255 4 99 0 3 257 3535 3789 Stenella araguata strain CBS 105.75 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA gene, partial sequence blastn 22418 449 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Stenella Stenella araguata
11206195 11206195 PRJNA1020641_P_NODE_2489_length_388_cov_0.888889_g2446_i0 PRJNA1020641 2489 388 0.888889 3.44888932 Pleosporales 92860 Fungi Fungi 689 0   NTclustered gi|31415585|gb|AY293788.1| 73001 g2446 i0 98.961 99.5567010309278 385 4 99 0 4 388 483 99 Phoma herbarum strain ATCC 26648 28S large subunit ribosomal RNA gene, partial sequence blastn 38628 695 0.99136690647482 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Phoma Phoma herbarum
23112867 23112867 PRJNA1020641_P_NODE_5959_length_249_cov_0.875000_g5916_i0 PRJNA1020641 5959 249 0.875 2.17875 Meyerozyma guilliermondii 4929 Fungi Fungi 176 1.28e-39   NTclustered gi|533206516|ref|NC_022154.1| 4929 g5916 i0 98.02 6.67871485943775 101 2 76 0 149 249 30188 30088 Meyerozyma guilliermondii strain CBS 2030 mitochondrion, complete genome blastn 1663 176 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
23955346 23955346 PRJNA1020641_P_NODE_5579_length_251_cov_0.865169_g5536_i0 PRJNA1020641 5579 251 0.865169 2.17157419 Opisthokonta 33154 Fungi Fungi 462 8.869999999999999e-126   NTclustered gi|2086743560|ref|XR_006253225.1| 182096 g5536 i0 100 106.334661354582 250 0 99 0 2 251 2172 1923 Aspergillus chevalieri 28S ribosomal RNA (ACHE_r70002S), rRNA blastn 26690 462 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus chevalieri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;