RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1016321" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1016321 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
159578 159578 PRJNA1016321_P_NODE_35801_length_299_cov_1.039823_g35570_i0 PRJNA1016321 35801 299 1.039823 3.10907077 Planctomycetia bacterium 2052181 Bacteria Bacteria 211 4.33e-50   NTclustered gi|1938772707|gb|CP054190.1| 2052181 g35570 i0 80.427 1.17056856187291 281 51 93 4 21 299 550209 549931 MAG: Planctomycetia bacterium isolate H1_PLA3 chromosome, complete genome blastn 350 211 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia       Planctomycetia bacterium
12913694 12913694 PRJNA1016321_P_NODE_57971_length_203_cov_8.069231_g57740_i0 PRJNA1016321 57971 203 8.069231 16.38053893 Blastopirellula sp. J2-11 2943192 Bacteria Bacteria 185 1.67e-42   NTclustered gi|2283101653|gb|CP097384.1| 2943192 g57740 i0 84.946 3.89162561576355 186 24 91 3 20 203 2919803 2919620 Blastopirellula sp. J2-11 chromosome blastn 790 185 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Blastopirellula Blastopirellula sp. J2-11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;