RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1016321" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA1016321 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8655930 8655930 PRJNA1016321_P_NODE_53307_length_244_cov_1.444444_g53076_i0 PRJNA1016321 53307 244 1.444444 3.52444336 Halalkalicoccus 332246 Archaea Archaea 368 1.92e-97   NTclustered gi|507148368|ref|NR_103171.1| 413810 g53076 i0 94.894 164.737704918033 235 12 96 0 1 235 370 604 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 40196 368 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
9930812 9930812 PRJNA1016321_P_NODE_38968_length_284_cov_1.696682_g38737_i0 PRJNA1016321 38968 284 1.696682 4.81857688 Halalkalicoccus 332246 Archaea Archaea 492 1.2999999999999999e-134   NTclustered gi|507148368|ref|NR_103171.1| 413810 g38737 i0 97.887 164.904929577465 284 6 100 0 1 284 945 662 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 46833 492 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
9930846 9930846 PRJNA1016321_P_NODE_56868_length_236_cov_2.656442_g56637_i0 PRJNA1016321 56868 236 2.656442 6.26920312 Halalkalicoccus 332246 Archaea Archaea 359 1.1099999999999999e-94   NTclustered gi|507148368|ref|NR_103171.1| 413810 g56637 i0 94.068 138.622881355932 236 14 100 0 1 236 1457 1692 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 32715 359 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;