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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1013345" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA1013345 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
158458 158458 PRJNA1013345_P_NODE_33601_length_152_cov_3.447619_g33471_i0 PRJNA1013345 33601 152 3.447619 5.24038088 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 259 6.82e-65   NTclustered gi|837350690|gb|CP011211.1| 1619070 g33471 i0 97.368 1 152 4 100 0 1 152 727806 727655 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 152 259 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
5261225 5261225 PRJNA1013345_P_NODE_27505_length_161_cov_0.894737_g27375_i0 PRJNA1013345 27505 161 0.894737 1.44052657 TM7 phylum sp. oral taxon 349 713051 Bacteria Bacteria 298 1.56e-76   NTclustered gi|2028829559|gb|CP072328.1| 713051 g27375 i0 100 1 161 0 100 0 1 161 609646 609486 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 161 298 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
6536587 6536587 PRJNA1013345_P_NODE_28566_length_160_cov_0.902655_g28436_i0 PRJNA1013345 28566 160 0.902655 1.444248 Candidatus Nanosynbacter sp. BB002 3393757 Bacteria Bacteria 246 5.67e-61   NTclustered gi|2692798772|gb|CP146064.1| 3393757 g28436 i0 94.375 1 160 9 100 0 1 160 222754 222913 Candidatus Nanosynbacter sp. BB002 chromosome, complete genome blastn 160 246 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. BB002
14186898 14186898 PRJNA1013345_P_NODE_23032_length_165_cov_1.728814_g22902_i0 PRJNA1013345 23032 165 1.728814 2.8525431 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 283 4.4899999999999995e-72   NTclustered gi|837350690|gb|CP011211.1| 1619070 g22902 i0 97.576 1 165 4 100 0 1 165 121838 122002 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 165 283 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
20559600 20559600 PRJNA1013345_P_NODE_29957_length_159_cov_0.910714_g29827_i0 PRJNA1013345 29957 159 0.910714 1.44803526 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 261 2.01e-65   NTclustered gi|837350690|gb|CP011211.1| 1619070 g29827 i0 96.226 1 159 6 100 0 1 159 488250 488408 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 159 261 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
24384321 24384321 PRJNA1013345_P_NODE_18440_length_175_cov_1.265625_g18310_i0 PRJNA1013345 18440 175 1.265625 2.21484375 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 291 2.8699999999999993e-74   NTclustered gi|837350690|gb|CP011211.1| 1619070 g18310 i0 96.571 1 175 6 100 0 1 175 487518 487344 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 175 291 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;