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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011844 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5258692 5258692 PRJNA1011844_P_NODE_112845_length_296_cov_1.376682_g104269_i0 PRJNA1011844 112845 296 1.376682 4.07497872 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 335 2.44e-87   NTclustered gi|402761731|gb|JX183997.1| 104788 g104269 i0 88.448 69.5033783783784 277 32 94 0 13 289 562 838 Macrotrachela quadricornifera isolate HR cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 20573 335 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
11636533 11636533 PRJNA1011844_P_NODE_96730_length_337_cov_1.083333_g88167_i0 PRJNA1011844 96730 337 1.083333 3.65083221 Lecane bulla 96446 Rotifera other_Eukaryota 303 7.95e-78   NTclustered gi|167842611|gb|EU188928.1| 96446 g88167 i0 86.014 74.8189910979228 286 37 84 3 3 286 299 15 Lecane bulla isolate Cattail D cytochrome oxidase subunit I-like (cox1) gene, partial sequence; mitochondrial blastn 25214 303 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
12910098 12910098 PRJNA1011844_P_NODE_170171_length_228_cov_3.580645_g161590_i0 PRJNA1011844 170171 228 3.580645 8.1638706 Adineta vaga 104782 Rotifera other_Eukaryota 132 2.54e-26   NTclustered gi|189313924|gb|EU637018.1| 104782 g161590 i0 93.258 1.87280701754386 89 6 72 0 126 214 5408 5496 Adineta vaga 7 transmembrane receptor 2, 7 transmembrane receptor 4, myosin alkali light chain, sodefrin precursor repeats A, sodefrin precursor repeats C, metal binding protein, tRNA methyltransferase, laminin-G, tetratricopeptide repeat containing protein, hsp82, hypothetical proteins, zinc carboxypeptidase, hypothetical protein, and saicars genes, complete cds; and hypothetical protein gene, partial cds blastn 427 132 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
15460614 15460614 PRJNA1011844_P_NODE_96993_length_336_cov_1.745247_g88430_i0 PRJNA1011844 96993 336 1.745247 5.86402992 Bdelloidea sp. MS-2017 2059315 Rotifera other_Eukaryota 577 4.229999999999999e-160   NTclustered gi|1385697273|gb|MG662211.1| 2059315 g88430 i0 98.471 97.3125 327 5 97 0 3 329 557 231 Bdelloidea sp. MS-2017 isolate GF366-3 18S ribosomal RNA gene, partial sequence blastn 32697 577 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria       Bdelloidea sp. MS-2017
18853715 18853715 PRJNA1011844_P_NODE_163455_length_238_cov_3.818182_g154874_i0 PRJNA1011844 163455 238 3.818182 9.08727316 Opisthokonta 33154 Rotifera other_Eukaryota 244 3.2899999999999996e-60   NTclustered gi|37785582|gb|AY210469.1| 96448 g154874 i0 86.638 72.0210084033613 232 18 95 9 11 236 605 829 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 17141 244 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
24382338 24382338 PRJNA1011844_P_NODE_150060_length_248_cov_1.662857_g141481_i0 PRJNA1011844 150060 248 1.662857 4.12388536 Brachionus rubens 392764 Rotifera other_Eukaryota 152 2.15e-32   NTclustered gi|632795131|gb|KJ489418.1| 392764 g141481 i0 79.279 2.5 222 42 89 4 17 236 5989 6208 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 620 152 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;