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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011844 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7379371 7379371 PRJNA1011844_P_NODE_125166_length_276_cov_1.886700_g116589_i0 PRJNA1011844 125166 276 1.8867 5.207292 Opisthokonta 33154 Platyhelminthes Platyhelminthes 54.7 0.007   NTclustered gi|48374999|gb|AY551107.1| 100414 g116589 i0 96.97 0.902173913043478 33 0 12 1 245 276 23 55 Endorchis piraeeba 18S ribosomal RNA gene, partial sequence blastn 249 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Proteocephalidea Monticelliidae Endorchis Endorchis piraeeba
7809016 7809016 PRJNA1011844_P_NODE_168427_length_231_cov_2.177215_g159846_i0 PRJNA1011844 168427 231 2.177215 5.02936665 Neppia sp. MR-2006 391277 Platyhelminthes Platyhelminthes 148 2.5599999999999997e-31   NTclustered gi|109631062|gb|DQ665982.1| 391277 g159846 i0 83.974 33.4199134199134 156 23 67 2 67 221 1195 1041 Neppia sp. MR-2006 28S ribosomal RNA gene, partial sequence blastn 7720 148 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Neppia Neppia sp. MR-2006
7809116 7809116 PRJNA1011844_P_NODE_177607_length_206_cov_4.812030_g169025_i0 PRJNA1011844 177607 206 4.81203 9.9127818 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 326 9.61e-85   NTclustered gi|28273263|gb|AY157151.1| 52061 g169025 i0 96.923 45.6990291262136 195 4 94 2 2 194 2935 2741 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 9414 326 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
12909706 12909706 PRJNA1011844_P_NODE_137071_length_261_cov_1.250000_g128493_i0 PRJNA1011844 137071 261 1.25 3.2625 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 60.2 1.42e-4   NTclustered gi|690488189|emb|LN032496.1| 99802 g128493 i0 100 0.122605363984674 32 0 12 0 132 163 3505 3474 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0031832 blastn 32 60.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
12911183 12911183 PRJNA1011844_P_NODE_69571_length_456_cov_6.798956_g61102_i0 PRJNA1011844 69571 456 6.7989560000000004 31.00323936 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.003   NTclustered gi|690460069|emb|LN002230.1| 99802 g61102 i0 100 0.881578947368421 30 0 7 0 49 78 6570 6541 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0002212 blastn 402 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
12911410 12911410 PRJNA1011844_P_NODE_85351_length_376_cov_10.792079_g76805_i0 PRJNA1011844 85351 376 10.792079 40.57821704 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.01   NTclustered gi|690466776|emb|LN005000.1| 99802 g76805 i0 100 0.0771276595744681 29 0 8 0 238 266 5050 5078 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0004953 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
16304661 16304661 PRJNA1011844_P_NODE_46133_length_673_cov_2.851667_g38010_i0 PRJNA1011844 46133 673 2.851667 19.19171891 Metazoa 33208 Platyhelminthes Platyhelminthes 54.7 0.019   NTclustered gi|1373851260|ref|XM_024492007.1| 6210 g38010 i0 100 0.233283803863299 29 0 4 0 299 327 7070 7042 Echinococcus granulosus Afadin (EGR_02758), partial mRNA blastn 157 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
17579649 17579649 PRJNA1011844_P_NODE_124854_length_276_cov_4.822660_g116277_i0 PRJNA1011844 124854 276 4.82266 13.3105416 Stenostomum 39238 Platyhelminthes Platyhelminthes 383 7.92e-102   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g116277 i0 92.884 8.80797101449275 267 13 95 3 2 262 8964 8698 Stenostomum sthenum mitochondrion, complete genome blastn 2431 383 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
18009220 18009220 PRJNA1011844_P_NODE_57035_length_553_cov_5.797917_g48673_i0 PRJNA1011844 57035 553 5.797917 32.06248101 Duplominona sp. n. 2 FS-2014 1578780 Platyhelminthes Platyhelminthes 265 6.42e-66   NTclustered gi|728882876|gb|KJ682435.1| 1578780 g48673 i0 81.073 50.2441229656419 354 48 63 17 17 362 1271 929 Duplominona sp. n. 2 FS-2014 isolate DNSPNA3 28S large subunit ribosomal RNA gene, partial sequence blastn 27785 265 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Monocelididae Duplominona Duplominona sp. n. 2 FS-2014
19282465 19282465 PRJNA1011844_P_NODE_28916_length_984_cov_11.714599_g22381_i0 PRJNA1011844 28916 984 11.714599 115.27165416 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.028   NTclustered gi|690484865|emb|LN028320.1| 99802 g22381 i0 100 0.0294715447154472 29 0 3 0 941 969 1330 1302 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0000540 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
21833744 21833744 PRJNA1011844_P_NODE_29918_length_960_cov_10.184893_g23249_i0 PRJNA1011844 29918 960 10.184893 97.7749728 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.008   NTclustered gi|687170330|emb|LN074246.1| 99802 g23249 i0 97.059 0.0958333333333333 34 0 4 1 361 394 1808 1776 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0002767 blastn 92 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;