contig_metadata
38 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1432359 | 1432359 | PRJNA1011844_P_NODE_66742_length_474_cov_19.007481_g58307_i0 | PRJNA1011844 | 66742 | 474 | 19.007481 | 90.09545994 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.046 | NTclustered | gi|698801171|ref|XM_009835313.1| | 112090 | g58307 | i0 | 100 | 0.0590717299578059 | 28 | 0 | 6 | 0 | 298 | 325 | 877 | 904 | Aphanomyces astaci hypothetical protein mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 1432800 | 1432800 | PRJNA1011844_P_NODE_98642_length_331_cov_1.848837_g90077_i0 | PRJNA1011844 | 98642 | 331 | 1.848837 | 6.11965047 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.031 | NTclustered | gi|698789685|ref|XM_009829573.1| | 112090 | g90077 | i0 | 100 | 0.338368580060423 | 28 | 0 | 8 | 0 | 53 | 80 | 122 | 95 | Aphanomyces astaci hypothetical protein mRNA | blastn | 112 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 2707747 | 2707747 | PRJNA1011844_P_NODE_59083_length_534_cov_196.119306_g50703_i0 | PRJNA1011844 | 59083 | 534 | 196.119306 | 1047.27709404 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 292 | 2.8399999999999998e-74 | NTclustered | gi|673019759|ref|XM_008865619.1| | 157072 | g50703 | i0 | 81.564 | 52.7191011235955 | 358 | 62 | 67 | 4 | 124 | 479 | 126 | 481 | Aphanomyces invadans 40S ribosomal protein S23 mRNA | blastn | 28152 | 292 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 3983299 | 3983299 | PRJNA1011844_P_NODE_26384_length_1052_cov_3.387130_g20219_i0 | PRJNA1011844 | 26384 | 1052 | 3.38713 | 35.6326076 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 499 | 3.18e-136 | NTclustered | gi|2795038971|ref|XM_067942088.1| | 4785 | g20219 | i0 | 77.886 | 68.7899239543726 | 823 | 168 | 78 | 12 | 231 | 1046 | 1407 | 592 | Phytophthora cinnamomi adenosylhomocysteinase (IUM83_17157), partial mRNA | blastn | 72367 | 499 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 3984454 | 3984454 | PRJNA1011844_P_NODE_95204_length_341_cov_6.328358_g86641_i0 | PRJNA1011844 | 95204 | 341 | 6.328358 | 21.57970078 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 145 | 5.17e-30 | NTclustered | gi|698788173|ref|XM_009828817.1| | 112090 | g86641 | i0 | 82.249 | 42.4369501466276 | 169 | 28 | 49 | 2 | 155 | 322 | 73 | 240 | Aphanomyces astaci histone H2B partial mRNA | blastn | 14471 | 145 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 5258942 | 5258942 | PRJNA1011844_P_NODE_132405_length_266_cov_4.072539_g123827_i0 | PRJNA1011844 | 132405 | 266 | 4.072539 | 10.83295374 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 211 | 3.79e-50 | NTclustered | gi|301108220|ref|XM_002903146.1| | 403677 | g123827 | i0 | 83.929 | 4.01127819548872 | 224 | 33 | 84 | 2 | 33 | 256 | 620 | 400 | Phytophthora infestans T30-4 40S ribosomal protein S9-1 (PITG_09563), mRNA | blastn | 1067 | 211 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 5259106 | 5259106 | PRJNA1011844_P_NODE_147185_length_250_cov_1.553672_g138606_i0 | PRJNA1011844 | 147185 | 250 | 1.553672 | 3.88418 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 222 | 1.63e-53 | NTclustered | gi|325194231|emb|FR825088.1| | 890382 | g138606 | i0 | 86.408 | 0.984 | 206 | 24 | 82 | 3 | 1 | 204 | 1215 | 1012 | Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 | blastn | 246 | 222 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 5259979 | 5259979 | PRJNA1011844_P_NODE_40225_length_760_cov_4.727802_g32435_i0 | PRJNA1011844 | 40225 | 760 | 4.727802 | 35.9312952 | Globisporangium ultimum | 2052682 | SAR_Eukaryotes | SAR_Eukaryotes | 174 | 1.5599999999999999e-38 | NTclustered | gi|299830435|ref|NC_014280.1| | 2052682 | g32435 | i0 | 75.462 | 14.4552631578947 | 379 | 82 | 49 | 10 | 246 | 619 | 1155 | 783 | Pythium ultimum mitochondrion, complete genome | blastn | 10986 | 174 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium ultimum | ||
| 5260503 | 5260503 | PRJNA1011844_P_NODE_73225_length_434_cov_169.623269_g64739_i0 | PRJNA1011844 | 73225 | 434 | 169.623269 | 736.16498746 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 224 | 8.389999999999998e-54 | NTclustered | gi|675211346|ref|XM_008916310.1| | 761204 | g64739 | i0 | 82.239 | 24.0069124423963 | 259 | 46 | 60 | 0 | 81 | 339 | 427 | 169 | Phytophthora parasitica INRA-310 60S ribosomal protein L44 mRNA | blastn | 10419 | 224 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 7809494 | 7809494 | PRJNA1011844_P_NODE_31727_length_919_cov_9.432624_g24808_i0 | PRJNA1011844 | 31727 | 919 | 9.432624 | 86.68581456 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 56.5 | 0.007 | NTclustered | gi|2794916464|ref|XM_067893463.1| | 164328 | g24808 | i0 | 89.13 | 0.495103373231774 | 46 | 3 | 5 | 2 | 424 | 468 | 166 | 210 | Phytophthora ramorum Elongation factor 1-beta (KRP23_8065), partial mRNA | blastn | 455 | 56.5 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 7810063 | 7810063 | PRJNA1011844_P_NODE_61127_length_517_cov_20.398649_g52723_i0 | PRJNA1011844 | 61127 | 517 | 20.398649 | 105.46101533 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 89.8 | 3.86e-13 | NTclustered | gi|695388958|ref|XM_009521018.1| | 67593 | g52723 | i0 | 74.38 | 8.50483558994197 | 242 | 46 | 45 | 14 | 163 | 393 | 329 | 93 | Phytophthora sojae hypothetical protein mRNA | blastn | 4397 | 89.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 8654867 | 8654867 | PRJNA1011844_P_NODE_113387_length_294_cov_7.787330_g104811_i0 | PRJNA1011844 | 113387 | 294 | 7.78733 | 22.8947502 | Albugo | 65356 | SAR_Eukaryotes | SAR_Eukaryotes | 73.1 | 2.09e-8 | NTclustered | gi|325183295|emb|FR824085.1| | 890382 | g104811 | i0 | 92.157 | 0.894557823129252 | 51 | 4 | 20 | 0 | 127 | 177 | 34707 | 34757 | Albugo laibachii Nc14, genomic contig CONTIG_40_NC14_v4_133649_231 | blastn | 263 | 73.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 8654978 | 8654978 | PRJNA1011844_P_NODE_131167_length_268_cov_1.902564_g122589_i0 | PRJNA1011844 | 131167 | 268 | 1.902564 | 5.09887152 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.025 | NTclustered | gi|813149770|ref|XM_012345142.1| | 695850 | g122589 | i0 | 100 | 0.328358208955224 | 28 | 0 | 10 | 0 | 8 | 35 | 589 | 562 | Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA | blastn | 88 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 9085433 | 9085433 | PRJNA1011844_P_NODE_89848_length_360_cov_0.909408_g81292_i0 | PRJNA1011844 | 89848 | 360 | 0.909408 | 3.2738688 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 82.4 | 4.35e-11 | NTclustered | gi|675179524|ref|XM_008900399.1| | 761204 | g81292 | i0 | 80.508 | 1.56111111111111 | 118 | 14 | 30 | 4 | 14 | 122 | 2299 | 2416 | Phytophthora parasitica INRA-310 translation elongation factor G mRNA | blastn | 562 | 82.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 10358979 | 10358979 | PRJNA1011844_P_NODE_11629_length_1671_cov_176.153942_g8370_i0 | PRJNA1011844 | 11629 | 1671 | 176.153942 | 2943.53237082 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 977 | 0 | NTclustered | gi|675199240|ref|XM_008910257.1| | 761204 | g8370 | i0 | 80.603 | 73.8450029922202 | 1294 | 227 | 77 | 20 | 155 | 1439 | 1695 | 417 | Phytophthora parasitica INRA-310 ATP synthase subunit beta, mitochondrial mRNA | blastn | 123395 | 977 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 10359140 | 10359140 | PRJNA1011844_P_NODE_126989_length_273_cov_6.585000_g118411_i0 | PRJNA1011844 | 126989 | 273 | 6.585 | 17.97705 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 110 | 1.47e-19 | NTclustered | gi|2795034154|ref|XM_067934539.1| | 4785 | g118411 | i0 | 89.535 | 2.39194139194139 | 86 | 9 | 32 | 0 | 188 | 273 | 483 | 398 | Phytophthora cinnamomi GTP-binding nuclear protein ran-1 (IUM83_10055), partial mRNA | blastn | 653 | 110 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 10359142 | 10359142 | PRJNA1011844_P_NODE_127029_length_273_cov_5.025000_g118451_i0 | PRJNA1011844 | 127029 | 273 | 5.025 | 13.71825 | Hyaloperonospora parasitica | 123356 | SAR_Eukaryotes | SAR_Eukaryotes | 468 | 2.0999999999999997e-127 | NTclustered | gi|53693101|gb|AY742752.1| | 123356 | g118451 | i0 | 98.855 | 94.5274725274725 | 262 | 3 | 96 | 0 | 12 | 273 | 721 | 982 | Hyaloperonospora parasitica 18S ribosomal RNA gene, partial sequence | blastn | 25806 | 468 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 10360643 | 10360643 | PRJNA1011844_P_NODE_5909_length_2227_cov_37.823120_g4053_i0 | PRJNA1011844 | 5909 | 2227 | 37.82312 | 842.3208824 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 787 | 0 | NTclustered | gi|675211386|ref|XM_008916330.1| | 761204 | g4053 | i0 | 76.439 | 31.5208801077683 | 1511 | 318 | 67 | 24 | 527 | 2026 | 1666 | 183 | Phytophthora parasitica INRA-310 chaperone dnaK mRNA | blastn | 70197 | 787 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 11634537 | 11634537 | PRJNA1011844_P_NODE_12550_length_1612_cov_287.955166_g9089_i0 | PRJNA1011844 | 12550 | 1612 | 287.955166 | 4641.83727592 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 929 | 0 | NTclustered | gi|675169410|ref|XM_008895342.1| | 761204 | g9089 | i0 | 78.665 | 64.8920595533499 | 1453 | 270 | 89 | 32 | 128 | 1557 | 1524 | 89 | Phytophthora parasitica INRA-310 adenosylhomocysteinase mRNA | blastn | 104606 | 929 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 11636167 | 11636167 | PRJNA1011844_P_NODE_71290_length_446_cov_2.147453_g62814_i0 | PRJNA1011844 | 71290 | 446 | 2.147453 | 9.57764038 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 213 | 1.87e-50 | NTclustered | gi|813198802|ref|XM_012353594.1| | 695850 | g62814 | i0 | 79.734 | 3.92152466367713 | 301 | 55 | 67 | 5 | 12 | 309 | 618 | 915 | Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA | blastn | 1749 | 213 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 11636194 | 11636194 | PRJNA1011844_P_NODE_73290_length_434_cov_4.955679_g64803_i0 | PRJNA1011844 | 73290 | 434 | 4.955679 | 21.50764686 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.042 | NTclustered | gi|695439915|ref|XM_009534536.1| | 67593 | g64803 | i0 | 100 | 0.0645161290322581 | 28 | 0 | 6 | 0 | 280 | 307 | 999 | 972 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 11636375 | 11636375 | PRJNA1011844_P_NODE_84550_length_380_cov_2.039088_g76005_i0 | PRJNA1011844 | 84550 | 380 | 2.039088 | 7.7485344 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 309 | 1.95e-79 | NTclustered | gi|2795018984|ref|XM_067929544.1| | 4785 | g76005 | i0 | 84.566 | 77.6315789473684 | 311 | 48 | 82 | 0 | 61 | 371 | 4811 | 4501 | Phytophthora cinnamomi sporangia induced dynein heavy chain (IUM83_05408), partial mRNA | blastn | 29500 | 309 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 12909761 | 12909761 | PRJNA1011844_P_NODE_141691_length_255_cov_3.104396_g133113_i0 | PRJNA1011844 | 141691 | 255 | 3.104396 | 7.9162098 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 154 | 6.17e-33 | NTclustered | gi|2794929670|ref|XM_067885386.1| | 164328 | g133113 | i0 | 79.452 | 0.858823529411765 | 219 | 43 | 85 | 2 | 15 | 232 | 944 | 727 | Phytophthora ramorum uncharacterized protein (KRP23_14551), partial mRNA | blastn | 219 | 154 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 12909998 | 12909998 | PRJNA1011844_P_NODE_16011_length_1424_cov_40.384160_g11731_i0 | PRJNA1011844 | 16011 | 1424 | 40.38416 | 575.0704384 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 691 | 0 | NTclustered | gi|675210554|ref|XM_008915914.1| | 761204 | g11731 | i0 | 77.914 | 53.3188202247191 | 1141 | 230 | 79 | 19 | 140 | 1269 | 1211 | 82 | Phytophthora parasitica INRA-310 ATP-dependent RNA helicase eIF4A partial mRNA | blastn | 75926 | 691 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 15029864 | 15029864 | PRJNA1011844_P_NODE_21332_length_1205_cov_196.305654_g16015_i0 | PRJNA1011844 | 21332 | 1205 | 196.305654 | 2365.4831307 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 381 | 1.38e-100 | NTclustered | gi|2795043405|ref|XM_067924303.1| | 4785 | g16015 | i0 | 79.924 | 23.9402489626556 | 523 | 101 | 43 | 4 | 591 | 1111 | 521 | 1 | Phytophthora cinnamomi Ras-like GTP-binding protein YPT1 (IUM83_00527), partial mRNA | blastn | 28848 | 381 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 15458587 | 15458587 | PRJNA1011844_P_NODE_125953_length_275_cov_1.727723_g117375_i0 | PRJNA1011844 | 125953 | 275 | 1.727723 | 4.75123825 | Hyaloperonospora parasitica | 123356 | SAR_Eukaryotes | SAR_Eukaryotes | 279 | 1.06e-70 | NTclustered | gi|187792697|emb|CU855849.2| | 123356 | g117375 | i0 | 86.8 | 1.87636363636364 | 250 | 33 | 91 | 0 | 25 | 274 | 105001 | 104752 | H.parasitica DNA sequence from clone HpEmoy2-19N16, complete sequence | blastn | 516 | 279 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 15458628 | 15458628 | PRJNA1011844_P_NODE_128753_length_271_cov_2.252525_g120175_i0 | PRJNA1011844 | 128753 | 271 | 2.252525 | 6.10434275 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 121 | 6.72e-23 | NTclustered | gi|695424503|ref|XM_009530655.1| | 67593 | g120175 | i0 | 80.488 | 7.18819188191882 | 164 | 27 | 59 | 5 | 65 | 224 | 682 | 520 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 1948 | 121 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 15459472 | 15459472 | PRJNA1011844_P_NODE_26373_length_1052_cov_8.617978_g20209_i0 | PRJNA1011844 | 26373 | 1052 | 8.617978 | 90.66112856 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 649 | 0 | NTclustered | gi|695438657|ref|XM_009534219.1| | 67593 | g20209 | i0 | 80.714 | 79.5180608365019 | 840 | 156 | 80 | 5 | 5 | 841 | 1136 | 300 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 83653 | 649 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 15460049 | 15460049 | PRJNA1011844_P_NODE_5673_length_2265_cov_14.865876_g3876_i0 | PRJNA1011844 | 5673 | 2265 | 14.865876 | 336.7120914 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 58.4 | 0.005 | NTclustered | gi|2795015725|ref|XM_067926009.1| | 4785 | g3876 | i0 | 100 | 0.0136865342163355 | 31 | 0 | 1 | 0 | 1430 | 1460 | 219 | 189 | Phytophthora cinnamomi GATS protein 3 (IUM83_02111), partial mRNA | blastn | 31 | 58.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 16733045 | 16733045 | PRJNA1011844_P_NODE_138094_length_259_cov_5.596774_g129516_i0 | PRJNA1011844 | 138094 | 259 | 5.596774 | 14.49564466 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 171 | 6.239999999999999e-38 | NTclustered | gi|673025809|ref|XM_008868644.1| | 157072 | g129516 | i0 | 82.234 | 6.44015444015444 | 197 | 35 | 76 | 0 | 52 | 248 | 1387 | 1191 | Aphanomyces invadans 26S protease regulatory subunit 7 mRNA | blastn | 1668 | 171 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 16734646 | 16734646 | PRJNA1011844_P_NODE_77094_length_413_cov_45.438235_g68590_i0 | PRJNA1011844 | 77094 | 413 | 45.438235 | 187.65991055 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 161 | 6.32e-35 | NTclustered | gi|695426839|ref|XM_009531227.1| | 67593 | g68590 | i0 | 86.667 | 4.37046004842615 | 150 | 14 | 36 | 3 | 214 | 363 | 419 | 276 | Phytophthora sojae hypothetical protein mRNA | blastn | 1805 | 161 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 19282503 | 19282503 | PRJNA1011844_P_NODE_30376_length_949_cov_182.845890_g23646_i0 | PRJNA1011844 | 30376 | 949 | 182.84589 | 1735.2074961 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 507 | 1.7e-138 | NTclustered | gi|2795052452|ref|XM_067926699.1| | 4785 | g23646 | i0 | 86.918 | 10.536354056902 | 451 | 59 | 48 | 0 | 352 | 802 | 519 | 69 | Phytophthora cinnamomi caltractin (IUM83_02754), partial mRNA | blastn | 9999 | 507 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 21832735 | 21832735 | PRJNA1011844_P_NODE_123938_length_278_cov_1.258537_g115361_i0 | PRJNA1011844 | 123938 | 278 | 1.258537 | 3.49873286 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 124 | 5.35e-24 | NTclustered | gi|301122654|ref|XM_002909008.1| | 403677 | g115361 | i0 | 87.736 | 0.381294964028777 | 106 | 13 | 38 | 0 | 9 | 114 | 598 | 493 | Phytophthora infestans T30-4 uncharacterized protein (PITG_00455), partial mRNA | blastn | 106 | 124 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 21834339 | 21834339 | PRJNA1011844_P_NODE_63438_length_499_cov_5.744131_g55022_i0 | PRJNA1011844 | 63438 | 499 | 5.744131 | 28.66321369 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 303 | 1.22e-77 | NTclustered | gi|1111669769|ref|NC_032052.1| | 157072 | g55022 | i0 | 78.936 | 83.8797595190381 | 451 | 91 | 90 | 4 | 36 | 484 | 9533 | 9085 | Aphanomyces invadans isolate NJM9701 mitochondrion, complete genome | blastn | 41856 | 303 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 21834525 | 21834525 | PRJNA1011844_P_NODE_75798_length_420_cov_9.913545_g67300_i0 | PRJNA1011844 | 75798 | 420 | 9.913545 | 41.636889 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 220 | 1.05e-52 | NTclustered | gi|301094309|ref|XM_002896215.1| | 403677 | g67300 | i0 | 81.818 | 8.31666666666667 | 264 | 46 | 63 | 2 | 10 | 272 | 3816 | 4078 | Phytophthora infestans T30-4 structural maintenance of chromosomes protein 4, putative (PITG_17936), mRNA | blastn | 3493 | 220 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 23108671 | 23108671 | PRJNA1011844_P_NODE_157779_length_243_cov_1.758824_g149199_i0 | PRJNA1011844 | 157779 | 243 | 1.758824 | 4.27394232 | Hyaloperonospora parasitica | 123356 | SAR_Eukaryotes | SAR_Eukaryotes | 313 | 9.1e-81 | NTclustered | gi|187467506|emb|CU633976.7| | 123356 | g149199 | i0 | 91.593 | 0.930041152263374 | 226 | 19 | 93 | 0 | 10 | 235 | 57436 | 57211 | H.parasitica DNA sequence from clone HpEmoy2-12D7, complete sequence | blastn | 226 | 313 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 23109751 | 23109751 | PRJNA1011844_P_NODE_58659_length_538_cov_9.879570_g50282_i0 | PRJNA1011844 | 58659 | 538 | 9.87957 | 53.1520866 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 56.5 | 0.004 | NTclustered | gi|2794880547|ref|XM_067891157.1| | 164328 | g50282 | i0 | 100 | 0.0557620817843866 | 30 | 0 | 6 | 0 | 424 | 453 | 152 | 123 | Phytophthora ramorum Eukaryotic translation initiation factor 2 subunit beta (KRP23_622), partial mRNA | blastn | 30 | 56.5 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 24383466 | 24383466 | PRJNA1011844_P_NODE_56240_length_560_cov_147.704312_g47891_i0 | PRJNA1011844 | 56240 | 560 | 147.704312 | 827.1441472 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 185 | 5.2099999999999996e-42 | NTclustered | gi|813156319|ref|XM_012346119.1| | 695850 | g47891 | i0 | 79.336 | 15.1303571428571 | 271 | 50 | 48 | 6 | 77 | 344 | 71 | 338 | Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA | blastn | 8473 | 185 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;