RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1011844 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9083504 9083504 PRJNA1011844_P_NODE_127548_length_273_cov_1.265000_g118970_i0 PRJNA1011844 127548 273 1.265 3.45345 Candidatus Hepatoplasma vulgare 3132032 Bacteria Bacteria 82.4 3.2e-11   NTclustered gi|2416256354|dbj|AP027131.1| 3132032 g118970 i0 84.706 3.25641025641026 85 10 30 3 8 90 478388 478471 MAG: Candidatus Hepatoplasma vulgare Av-JP DNA, complete genome blastn 889 82.4 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Candidatus Hepatoplasmataceae Candidatus Hepatoplasma Candidatus Hepatoplasma vulgare
21834609 21834609 PRJNA1011844_P_NODE_82418_length_389_cov_2.829114_g73880_i0 PRJNA1011844 82418 389 2.829114 11.00525346 Mesomycoplasma ovipneumoniae 29562 Bacteria Bacteria 52.8 0.037   NTclustered gi|2582036355|gb|CP134941.1| 29562 g73880 i0 100 0.0719794344473008 28 0 7 0 273 300 683130 683103 Mesomycoplasma ovipneumoniae strain MoG225L22A chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma ovipneumoniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;