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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011844 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1001632 1001632 PRJNA1011844_P_NODE_101581_length_322_cov_7.273092_g93011_i0 PRJNA1011844 101581 322 7.273092 23.41935624 Metazoa 33208 Echinodermata other_Eukaryota 62.1 5.02e-5   NTclustered gi|1752398133|ref|XM_779257.5| 7668 g93011 i0 92.857 11.5124223602484 42 3 13 0 255 296 4180 4221 PREDICTED: Strongylocentrotus purpuratus protein timeless homolog (LOC579123), mRNA blastn 3707 62.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
3982813 3982813 PRJNA1011844_P_NODE_155984_length_244_cov_2.245614_g147404_i0 PRJNA1011844 155984 244 2.2456140000000002 5.47929816 Patiria miniata 46514 Echinodermata other_Eukaryota 73.1 1.69e-8   NTclustered gi|1944931763|ref|XM_038221485.1| 46514 g147404 i0 97.619 6.90573770491803 42 1 17 0 140 181 667 626 PREDICTED: Patiria miniata protein disulfide-isomerase A4-like (LOC119745254), mRNA blastn 1685 73.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
11634266 11634266 PRJNA1011844_P_NODE_103610_length_317_cov_2.590164_g95040_i0 PRJNA1011844 103610 317 2.590164 8.21081988 Peniagone sp. AKM-2016 1902931 Echinodermata other_Eukaryota 54.7 0.008   NTclustered gi|1160550721|gb|KX856877.1| 1902931 g95040 i0 100 0.0914826498422713 29 0 9 0 278 306 857 829 Peniagone sp. AKM-2016 voucher SIO:BIC:E5608 28S ribosomal RNA gene, partial sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Elasipodida Elpidiidae Peniagone Peniagone sp. AKM-2016
14186031 14186031 PRJNA1011844_P_NODE_59632_length_530_cov_2.921225_g51246_i0 PRJNA1011844 59632 530 2.921225 15.4824925 Diadema antillarum 105358 Echinodermata other_Eukaryota 54.7 0.014   NTclustered gi|2919391526|ref|XM_071630042.1| 105358 g51246 i0 100 0.109433962264151 29 0 5 0 295 323 426 398 PREDICTED: Diadema antillarum chromodomain-helicase-DNA-binding protein 1-like (LOC139718575), mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
15459354 15459354 PRJNA1011844_P_NODE_21353_length_1205_cov_8.462898_g16033_i0 PRJNA1011844 21353 1205 8.462898 101.9779209 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.034   NTclustered gi|2707360668|ref|XM_064097912.1| 7653 g16033 i0 100 0.0240663900414938 29 0 2 0 28 56 129 101 PREDICTED: Lytechinus pictus uncharacterized LOC129256009 (LOC129256009), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
18007968 18007968 PRJNA1011844_P_NODE_143735_length_253_cov_1.850000_g135157_i0 PRJNA1011844 143735 253 1.85 4.6805 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 52.8 0.023   NTclustered gi|2037943374|ref|XM_041618690.1| 7654 g135157 i0 100 0.221343873517787 28 0 11 0 204 231 2390 2417 PREDICTED: Lytechinus variegatus transducin beta-like protein 3 (LOC121423336), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
19282066 19282066 PRJNA1011844_P_NODE_16996_length_1377_cov_27.056748_g12518_i0 PRJNA1011844 16996 1377 27.056748 372.57141996 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 193 7.97e-44   NTclustered gi|2037982874|ref|XM_041604031.1| 7654 g12518 i0 81.25 0.55119825708061 240 43 17 2 514 752 2438 2676 PREDICTED: Lytechinus variegatus uncharacterized LOC121411355 (LOC121411355), transcript variant X1, mRNA blastn 759 193 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;