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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA1011844 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2706095 2706095 PRJNA1011844_P_NODE_115143_length_291_cov_2.527523_g106567_i0 PRJNA1011844 115143 291 2.527523 7.35509193 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 54.7 0.007   NTclustered gi|470469247|ref|XM_004341931.1| 1257118 g106567 i0 94.444 0.123711340206186 36 1 12 1 163 198 1385 1351 Acanthamoeba castellanii str. Neff K+ channel tetramerization subfamily protein (ACA1_050340), partial mRNA blastn 36 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3552443 3552443 PRJNA1011844_P_NODE_136963_length_261_cov_1.473404_g128385_i0 PRJNA1011844 136963 261 1.473404 3.84558444 Acanthamoeba 5754 Discosea other_Eukaryota 248 2.8299999999999997e-61   NTclustered gi|881632|gb|U29609.1|ACU29609 5755 g128385 i0 86.878 9.21455938697318 221 29 85 0 11 231 611 831 Acanthamoeba castellanii actin-related protein 2 Arp2 mRNA, complete cds blastn 2405 248 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3982511 3982511 PRJNA1011844_P_NODE_132624_length_266_cov_2.264249_g124046_i0 PRJNA1011844 132624 266 2.264249 6.02290234 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 154 6.480000000000001e-33   NTclustered gi|470468907|ref|XM_004341900.1| 1257118 g124046 i0 83.636 1.86466165413534 165 25 62 2 92 255 19 182 Acanthamoeba castellanii str. Neff Calponin domain containing protein (ACA1_133610), partial mRNA blastn 496 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3983890 3983890 PRJNA1011844_P_NODE_57384_length_550_cov_3.865828_g49021_i0 PRJNA1011844 57384 550 3.865828 21.262054 Paravannella minima 1443144 Discosea other_Eukaryota 977 0   NTclustered gi|571331048|gb|KF895375.1| 1443144 g49021 i0 99.626 319.392727272727 535 2 97 0 4 538 1337 803 Paravannella minima strain CCAP 1533/1 18S ribosomal RNA gene, partial sequence blastn 175666 977 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
6105530 6105530 PRJNA1011844_P_NODE_8305_length_1944_cov_10.249065_g5848_i0 PRJNA1011844 8305 1944 10.249065 199.2418236 Vannella 95228 Discosea other_Eukaryota 250 6.63e-61   NTclustered gi|300078499|gb|GU001161.1| 197531 g5848 i0 76.164 14.8348765432099 537 92 27 25 449 975 1785 2295 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28839 250 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
6533970 6533970 PRJNA1011844_P_NODE_112386_length_297_cov_1.959821_g103810_i0 PRJNA1011844 112386 297 1.959821 5.82066837 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 185 2.61e-42   NTclustered gi|470414437|ref|XM_004336640.1| 1257118 g103810 i0 85.165 1.22558922558923 182 26 61 1 32 212 186 5 Acanthamoeba castellanii str. Neff LIM domain containing protein (ACA1_125280), partial mRNA blastn 364 185 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7808684 7808684 PRJNA1011844_P_NODE_140727_length_256_cov_4.387978_g132149_i0 PRJNA1011844 140727 256 4.387978 11.23322368 Vannella ebro 207334 Discosea other_Eukaryota 366 7.3199999999999995e-97   NTclustered gi|33946344|gb|AY294151.1| 207334 g132149 i0 94.515 95.3125 237 13 93 0 11 247 411 175 Vannella ebro actin mRNA, complete cds blastn 24400 366 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
7810525 7810525 PRJNA1011844_P_NODE_96047_length_339_cov_1.548872_g87484_i0 PRJNA1011844 96047 339 1.548872 5.25067608 Cochliopodium minutoidum 703020 Discosea other_Eukaryota 178 5.06e-40   NTclustered gi|659103914|gb|KJ569720.1| 703020 g87484 i0 86.31 28.5781710914454 168 17 49 4 83 247 1520 1356 Cochliopodium minutoidum clone 1306 18S ribosomal RNA gene, partial sequence blastn 9688 178 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minutoidum
9083626 9083626 PRJNA1011844_P_NODE_136468_length_261_cov_3.893617_g127890_i0 PRJNA1011844 136468 261 3.893617 10.16234037 Paravannella minima 1443144 Discosea other_Eukaryota 446 9.339999999999999e-121   NTclustered gi|571331049|gb|KF895376.1| 1443144 g127890 i0 99.59 93.3908045977011 244 1 93 0 5 248 525 282 Paravannella minima strain CCAP 1533/1 clone 1 actin gene, partial cds blastn 24375 446 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
9084965 9084965 PRJNA1011844_P_NODE_56768_length_556_cov_2.948240_g48411_i0 PRJNA1011844 56768 556 2.94824 16.3922144 Paramoeba branchiphila 308475 Discosea other_Eukaryota 346 2.24e-90   NTclustered gi|226347442|gb|FJ807261.1| 308475 g48411 i0 80.215 81.1564748201439 465 86 83 6 79 540 1042 581 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 45123 346 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
9085028 9085028 PRJNA1011844_P_NODE_60428_length_523_cov_12.424444_g52034_i0 PRJNA1011844 60428 523 12.424444 64.97984212 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 848 0   NTclustered gi|62865939|gb|AY929914.1| 325077 g52034 i0 96.505 99.7304015296367 515 15 98 2 10 523 1134 1646 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 52159 848 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
10359412 10359412 PRJNA1011844_P_NODE_148929_length_249_cov_0.875000_g140350_i0 PRJNA1011844 148929 249 0.875 2.17875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 281 2.64e-71   NTclustered gi|300078498|gb|GU001160.1| 5755 g140350 i0 91.707 25.0481927710843 205 13 82 3 34 238 5596 5396 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6237 281 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12910038 12910038 PRJNA1011844_P_NODE_163991_length_237_cov_6.420732_g155410_i0 PRJNA1011844 163991 237 6.420732 15.21713484 Acanthamoeba sp. 5756 Discosea other_Eukaryota 185 2.01e-42   NTclustered gi|2044079960|gb|MZ272151.1| 5756 g155410 i0 87.654 70.8523206751055 162 17 68 3 75 236 278 436 Acanthamoeba sp. isolate AcW92 small subunit ribosomal RNA gene, partial sequence blastn 16792 185 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
14186446 14186446 PRJNA1011844_P_NODE_87732_length_367_cov_6.653061_g79181_i0 PRJNA1011844 87732 367 6.653061 24.41673387 Ripella sp. 1973050 Discosea other_Eukaryota 505 2.229999999999999e-138   NTclustered gi|2666517890|gb|PP259001.1| 1973050 g79181 i0 93.787 90.3923705722071 338 18 91 3 33 367 224 561 Ripella sp. strain CHIESE60 small subunit ribosomal RNA gene, partial sequence blastn 33174 505 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp.
16734853 16734853 PRJNA1011844_P_NODE_92834_length_349_cov_2.771739_g84275_i0 PRJNA1011844 92834 349 2.771739 9.67336911 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 274 6.46e-69   NTclustered gi|470439732|ref|XM_004339176.1| 1257118 g84275 i0 80.912 37.2836676217765 351 63 100 3 1 349 129 477 Acanthamoeba castellanii str. Neff ribosomal L15, putative (ACA1_058770), partial mRNA blastn 13012 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18008098 18008098 PRJNA1011844_P_NODE_154415_length_245_cov_2.244186_g145835_i0 PRJNA1011844 154415 245 2.244186 5.4982557 Cochliopodium actinophorum 703021 Discosea other_Eukaryota 353 5.41e-93   NTclustered gi|330902873|gb|JF298262.1| 703021 g145835 i0 93.991 90.2897959183673 233 14 95 0 3 235 934 702 Cochliopodium actinophorum clone 2104 actin gene, partial cds blastn 22121 353 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium actinophorum
18008332 18008332 PRJNA1011844_P_NODE_172995_length_222_cov_5.208054_g164414_i0 PRJNA1011844 172995 222 5.208054 11.56187988 Cochliopodium sp. JvW-2015 1678068 Discosea other_Eukaryota 372 1.33e-98   NTclustered gi|861554067|gb|KP719191.1| 1678068 g164414 i0 98.578 65.2162162162162 211 2 95 1 3 213 608 399 Cochliopodium sp. JvW-2015 strain A1HEB clone 1 small subunit ribosomal RNA gene, partial sequence blastn 14478 372 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. JvW-2015
18853480 18853480 PRJNA1011844_P_NODE_122755_length_279_cov_3.966019_g114178_i0 PRJNA1011844 122755 279 3.966019 11.06519301 Acanthamoeba 5754 Discosea other_Eukaryota 348 2.93e-91   NTclustered gi|5565|emb|V00002.1| 5755 g114178 i0 91.221 78.1397849462366 262 14 91 7 1 253 362 101 Acanthamoeba castelani gene encoding actin I blastn 21801 348 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19282126 19282126 PRJNA1011844_P_NODE_176856_length_208_cov_9.325926_g168274_i0 PRJNA1011844 176856 208 9.325926 19.39792608 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 363 7.409999999999998e-96   NTclustered gi|62865939|gb|AY929914.1| 325077 g168274 i0 100 84.7115384615385 196 0 94 0 8 203 198 3 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 17620 363 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
19283251 19283251 PRJNA1011844_P_NODE_71656_length_443_cov_23.351351_g63177_i0 PRJNA1011844 71656 443 23.351351 103.44648493 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 664 0   NTclustered gi|62865939|gb|AY929914.1| 325077 g63177 i0 95.294 97 425 9 96 7 9 433 964 551 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 42971 664 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
20557452 20557452 PRJNA1011844_P_NODE_151877_length_247_cov_0.885057_g143298_i0 PRJNA1011844 151877 247 0.885057 2.18609079 Thecamoeba foliovenanda 2653195 Discosea other_Eukaryota 429 8.83e-116   NTclustered gi|1758284524|gb|MN544291.1| 2653195 g143298 i0 100 3.25101214574899 232 0 94 0 7 238 1210 979 Thecamoeba foliovenanda strain Ta68 small subunit ribosomal RNA gene, partial sequence blastn 803 429 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba foliovenanda
21833154 21833154 PRJNA1011844_P_NODE_156678_length_244_cov_0.900585_g148098_i0 PRJNA1011844 156678 244 0.900585 2.1974274 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 1.64e-28   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g148098 i0 78.636 1.38524590163934 220 40 89 7 20 236 2070 2285 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 338 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24383553 24383553 PRJNA1011844_P_NODE_61720_length_513_cov_2.684091_g53311_i0 PRJNA1011844 61720 513 2.684091 13.76938683 Cochliopodium sp. JvW-2015 1678068 Discosea other_Eukaryota 924 0   NTclustered gi|861554067|gb|KP719191.1| 1678068 g53311 i0 99.606 68.6510721247563 507 1 99 1 3 509 1238 733 Cochliopodium sp. JvW-2015 strain A1HEB clone 1 small subunit ribosomal RNA gene, partial sequence blastn 35218 924 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. JvW-2015
24383694 24383694 PRJNA1011844_P_NODE_70880_length_448_cov_6.893333_g62404_i0 PRJNA1011844 70880 448 6.893333 30.88213184 Cochliopodium sp. JvW-2015 1678068 Discosea other_Eukaryota 785 0   NTclustered gi|861554067|gb|KP719191.1| 1678068 g62404 i0 100 54.9330357142857 425 0 95 0 21 445 1 425 Cochliopodium sp. JvW-2015 strain A1HEB clone 1 small subunit ribosomal RNA gene, partial sequence blastn 24610 785 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. JvW-2015

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;