RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1011844 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14184502 14184502 PRJNA1011844_P_NODE_121392_length_281_cov_3.937500_g112815_i0 PRJNA1011844 121392 281 3.9375 11.064375 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 233 8.62e-57   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g112815 i0 82.562 237.583629893238 281 34 96 13 8 278 161787 162062 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 66761 233 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
14184869 14184869 PRJNA1011844_P_NODE_150792_length_248_cov_0.880000_g142213_i0 PRJNA1011844 150792 248 0.88 2.1824 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 230 9.65e-56   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g142213 i0 88.144 153.528225806452 194 21 78 2 46 238 160575 160383 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 38075 230 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
19281990 19281990 PRJNA1011844_P_NODE_163176_length_239_cov_2.138554_g154595_i0 PRJNA1011844 163176 239 2.138554 5.11114406 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 322 1.48e-83   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g154595 i0 92.478 225.907949790795 226 16 95 1 14 239 162648 162872 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 53992 322 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;