RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1011844 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2706447 2706447 PRJNA1011844_P_NODE_142203_length_255_cov_1.318681_g133625_i0 PRJNA1011844 142203 255 1.318681 3.36263655 Tupanvirus salinum 3060758 Viruses Viruses 63.9 1.07e-5   NTclustered gi|2500358058|ref|NC_075039.1| 2126985 g133625 i0 95 0.392156862745098 40 2 16 0 33 72 451405 451366 Tupanvirus soda lake, partial genome blastn 100 63.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
6534706 6534706 PRJNA1011844_P_NODE_171566_length_226_cov_3.777778_g162985_i0 PRJNA1011844 171566 226 3.777778 8.53777828 Aviadenovirus hydropericardii 3250174 Viruses Viruses 56.5 0.002   NTclustered gi|1779935074|gb|MK572850.1| 190063 g162985 i0 97.059 0.150442477876106 34 0 15 1 130 163 44016 43984 Fowl aviadenovirus C strain INT4-ATTENUATED-AG234 blastn 34 56.5 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Aviadenovirus Aviadenovirus hydropericardii
11205366 11205366 PRJNA1011844_P_NODE_173149_length_221_cov_9.297297_g164568_i0 PRJNA1011844 173149 221 9.297297 20.54702637 root 1 Root_unresolved Root_unresolved 374 3.68e-99   NTclustered gi|313361|emb|X73487.1| 28282 g164568 i0 100 17.3619909502262 202 0 91 0 12 213 30915 31116 Adenovirus type 12 DNA, complete genome blastn 3837 374 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus adami

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;