RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1011844 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4829764 4829764 PRJNA1011844_P_NODE_119104_length_285_cov_1.339623_g110527_i0 PRJNA1011844 119104 285 1.339623 3.81792555 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 226 1.47e-54   NTclustered gi|118766727|gb|DQ925099.1| 413579 g110527 i0 82.022 88.880701754386 267 46 93 2 10 275 678 413 Oxymonadida environmental sample clone 11 beta-tubulin (Btub) mRNA, partial cds blastn 25331 226 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
16734785 16734785 PRJNA1011844_P_NODE_87754_length_367_cov_5.510204_g79203_i0 PRJNA1011844 87754 367 5.510204 20.22244868 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.035   NTclustered gi|2794956908|ref|XM_067862751.1| 2049356 g79203 i0 100 0.0762942779291553 28 0 8 0 105 132 961 988 Monocercomonoides exilis putative Cyclin (MONOS_1031), mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;