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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1011844" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA1011844 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5259298 5259298 PRJNA1011844_P_NODE_162305_length_240_cov_3.113772_g153724_i0 PRJNA1011844 162305 240 3.113772 7.4730528 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|923134524|ref|XM_013905274.1| 461836 g153724 i0 100 0.125 30 0 13 0 87 116 2210 2181 Thecamonas trahens ATCC 50062 Ak7-A-prov protein (AMSG_02893), partial mRNA blastn 30 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
11635596 11635596 PRJNA1011844_P_NODE_3710_length_2663_cov_29.276834_g2489_i0 PRJNA1011844 3710 2663 29.276834 779.64208942 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.021   NTclustered gi|923131798|ref|XM_013903911.1| 461836 g2489 i0 96.97 0.0123920390536988 33 1 1 0 1014 1046 356 388 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_11788), mRNA blastn 33 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
11636161 11636161 PRJNA1011844_P_NODE_70890_length_448_cov_5.632000_g62414_i0 PRJNA1011844 70890 448 5.632 25.23136 Thecamonas trahens 529818 Root_unresolved Root_unresolved 58.4 0.001   NTclustered gi|923133612|ref|XM_013904818.1| 461836 g62414 i0 94.595 0.0825892857142857 37 2 8 0 208 244 309 273 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_02926), partial mRNA blastn 37 58.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19283260 19283260 PRJNA1011844_P_NODE_72376_length_439_cov_5.248634_g63891_i0 PRJNA1011844 72376 439 5.248634 23.04150326 Thecamonas trahens 529818 Root_unresolved Root_unresolved 54.7 0.012   NTclustered gi|923126119|ref|XM_013901073.1| 461836 g63891 i0 100 0.464692482915718 29 0 7 0 277 305 2451 2479 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_07055), partial mRNA blastn 204 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;