RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1011833" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011833 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2705745 2705745 PRJNA1011833_S_NODE_47983_length_167_cov_1.548387_g47563_i0 PRJNA1011833 47983 167 1.548387 2.58580629 Octopus sinensis 2607531 Mollusca Mollusca 169 1.33e-37   NTclustered gi|1697381098|ref|XM_029799679.1| 2607531 g47563 i0 84.94 16.4251497005988 166 25 99 0 2 167 214 379 PREDICTED: Octopus sinensis uncharacterized LOC115229305 (LOC115229305), mRNA blastn 2743 169 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
6533732 6533732 PRJNA1011833_S_NODE_9886_length_372_cov_2.848024_g9468_i0 PRJNA1011833 9886 372 2.848024 10.59464928 Anadara broughtonii 148819 Mollusca Mollusca 54.7 0.01   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g9468 i0 96.875 0.311827956989247 32 1 9 0 1 32 29 60 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
8654741 8654741 PRJNA1011833_S_NODE_9827_length_372_cov_38.468085_g9409_i0 PRJNA1011833 9827 372 38.468085 143.1012762 Opisthokonta 33154 Mollusca Mollusca 252 3.25e-62   NTclustered gi|315439549|gb|GU338004.1| 31210 g9409 i0 81.529 64.0295698924731 314 50 84 8 57 367 1134 826 Sepia esculenta actin mRNA, complete cds blastn 23819 252 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion esculentum
14183946 14183946 PRJNA1011833_S_NODE_17652_length_288_cov_2.620408_g17232_i0 PRJNA1011833 17652 288 2.620408 7.54677504 Ruditapes philippinarum 129788 Mollusca Mollusca 54.7 0.007   NTclustered gi|2616580565|ref|XM_060720728.1| 129788 g17232 i0 100 0.201388888888889 29 0 10 0 58 86 1131 1103 PREDICTED: Ruditapes philippinarum procathepsin L-like (LOC132734027), transcript variant X1, mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
17579451 17579451 PRJNA1011833_S_NODE_15014_length_311_cov_6.436567_g14594_i0 PRJNA1011833 15014 311 6.436567 20.01772337 root 1 Root_unresolved Root_unresolved 54.7 0.008   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g14594 i0 100 0.366559485530547 29 0 9 0 1 29 29 57 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 114 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
18853277 18853277 PRJNA1011833_S_NODE_23215_length_248_cov_2.107317_g22795_i0 PRJNA1011833 23215 248 2.107317 5.22614616 root 1 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g22795 i0 100 0.459677419354839 29 0 12 0 220 248 57 29 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 114 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
21403663 21403663 PRJNA1011833_S_NODE_15497_length_307_cov_2.174242_g15077_i0 PRJNA1011833 15497 307 2.174242 6.67492294 root 1 Root_unresolved Root_unresolved 54.7 0.008   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g15077 i0 100 0.371335504885993 29 0 9 0 279 307 57 29 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 114 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
21832065 21832065 PRJNA1011833_S_NODE_10478_length_363_cov_6.562500_g10060_i0 PRJNA1011833 10478 363 6.5625 23.821875 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.034   NTclustered gi|2912984370|dbj|AP039589.1| 145626 g10060 i0 100 0.0771349862258953 28 0 8 0 195 222 19741449 19741422 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 8, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;