RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1011833" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011833 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1430356 1430356 PRJNA1011833_S_NODE_8002_length_401_cov_4.326816_g7585_i0 PRJNA1011833 8002 401 4.326816 17.35053216 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|916416283|ref|XM_013373919.1| 5802 g7585 i0 100 0.214463840399002 30 0 7 0 54 83 623 594 Eimeria tenella uncharacterized protein (ETH_00000385), partial mRNA blastn 86 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
3981823 3981823 PRJNA1011833_S_NODE_32004_length_207_cov_13.835366_g31584_i0 PRJNA1011833 32004 207 13.835366 28.63920762 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g31584 i0 100 0.27536231884058 29 0 14 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
7807969 7807969 PRJNA1011833_S_NODE_34127_length_200_cov_2.140127_g33707_i0 PRJNA1011833 34127 200 2.140127 4.280254 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.017   NTclustered gi|2742502725|gb|PP905714.1| 447216 g33707 i0 100 0.28 28 0 14 0 1 28 1198 1225 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
9082822 9082822 PRJNA1011833_S_NODE_15128_length_310_cov_5.595506_g14708_i0 PRJNA1011833 15128 310 5.595506 17.3460686 Plasmodium knowlesi 5850 SAR_Eukaryotes SAR_Eukaryotes 65.8 3.72e-6   NTclustered gi|221052297|ref|XM_002257689.1| 5851 g14708 i0 93.333 5.81612903225806 45 2 14 1 264 307 1291 1247 Plasmodium knowlesi strain H conserved Plasmodium protein, unknown function (PKNH_0205400), partial mRNA blastn 1803 65.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
9082837 9082837 PRJNA1011833_S_NODE_18328_length_282_cov_58.857741_g17908_i0 PRJNA1011833 18328 282 58.857741 165.97882962 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|2742502725|gb|PP905714.1| 447216 g17908 i0 100 0.198581560283688 28 0 10 0 1 28 1198 1225 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
11633940 11633940 PRJNA1011833_S_NODE_20410_length_267_cov_1.593750_g19990_i0 PRJNA1011833 20410 267 1.59375 4.2553125 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.024   NTclustered gi|2742502725|gb|PP905714.1| 447216 g19990 i0 90.244 0.307116104868914 41 3 15 1 228 267 1238 1198 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 82 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
18007170 18007170 PRJNA1011833_S_NODE_35255_length_197_cov_1.246753_g34835_i0 PRJNA1011833 35255 197 1.246753 2.45610341 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.017   NTclustered gi|1620132018|ref|XM_028674360.1| 5849 g34835 i0 96.774 0.157360406091371 31 1 16 0 6 36 1061 1031 Plasmodium gallinaceum aspartate--tRNA ligase, putative (PGAL8A_00035800), partial mRNA blastn 31 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
19280851 19280851 PRJNA1011833_S_NODE_21176_length_261_cov_3.931193_g20756_i0 PRJNA1011833 21176 261 3.931193 10.26041373 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g20756 i0 100 0.440613026819923 30 0 11 0 1 30 12 41 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 115 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;