RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1010780" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1429869 1429869 PRJNA1010780_S_NODE_22562_length_353_cov_3.050314_g21273_i0 PRJNA1010780 22562 353 3.050314 10.76760842 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 7.17e-4   NTclustered gi|2794952209|ref|XM_067875376.1| 2049356 g21273 i0 97.059 1.3399433427762 34 1 10 0 137 170 7771 7804 Monocercomonoides exilis uncharacterized protein (MONOS_5246), partial mRNA blastn 473 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
12908725 12908725 PRJNA1010780_S_NODE_14011_length_579_cov_1.731618_g12839_i0 PRJNA1010780 14011 579 1.731618 10.02606822 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 76.8 3.39e-9   NTclustered gi|2794967278|ref|XM_067871996.1| 2049356 g12839 i0 79.439 0.459412780656304 107 22 18 0 250 356 427 533 Monocercomonoides exilis putative DEAD-box ATP-dependent RNA helicase 56 (MONOS_2099), mRNA blastn 266 76.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
12908869 12908869 PRJNA1010780_S_NODE_43571_length_193_cov_3.727848_g42282_i0 PRJNA1010780 43571 193 3.727848 7.19474664 Trimastix marina 137419 Preaxostyla other_Eukaryota 158 3.43e-34   NTclustered gi|84105342|gb|DQ295218.1| 137419 g42282 i0 81.675 9.89119170984456 191 33 98 2 1 190 709 898 Trimastix marina beta tubulin gene, partial cds blastn 1909 158 1 Eukaryota Metamonada   Preaxostyla     Trimastigidae Trimastix Trimastix marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;