RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

34 rows where analysis = "blastn", bioproject = "PRJNA1010780" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 34 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010780 · 34 ✖

analysis 1

  • blastn · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
155136 155136 PRJNA1010780_S_NODE_28061_length_282_cov_10.599190_g26772_i0 PRJNA1010780 28061 282 10.59919 29.8897158 Patella vulgata 6465 Mollusca Mollusca 176 1.48e-39   NTclustered gi|2506339511|ref|XM_050561182.2| 6465 g26772 i0 89.928 47.3475177304965 139 11 48 1 1 136 1306 1444 PREDICTED: Patella vulgata tubulin alpha-2/alpha-4 chain (LOC126830781), mRNA blastn 13352 176 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
1429851 1429851 PRJNA1010780_S_NODE_19102_length_422_cov_7.720930_g17821_i0 PRJNA1010780 19102 422 7.72093 32.5823246 Lottia gigantea 225164 Mollusca Mollusca 340 7.75e-89   NTclustered gi|676453046|ref|XM_009054981.1| 225164 g17821 i0 87.889 64.936018957346 289 35 68 0 1 289 412 124 Lottia gigantea hypothetical protein mRNA blastn 27403 340 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
1429994 1429994 PRJNA1010780_S_NODE_5562_length_1143_cov_14.513538_g5018_i0 PRJNA1010780 5562 1143 14.513538 165.88973934 Mytilus edulis 6550 Mollusca Mollusca 824 0   NTclustered gi|2912438933|ref|XM_071270510.1| 6550 g5018 i0 83.732 72.1426071741032 879 135 76 8 4 877 766 1641 PREDICTED: Mytilus edulis tubulin beta-4B chain-like (LOC139485864), transcript variant X1, mRNA blastn 82459 824 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
2705311 2705311 PRJNA1010780_S_NODE_18523_length_436_cov_5.653367_g17245_i0 PRJNA1010780 18523 436 5.653367 24.64868012 Mytilus californianus 6549 Mollusca Mollusca 381 4.729999999999999e-101   NTclustered gi|2334776013|ref|XM_052212626.1| 6549 g17245 i0 82.529 94.7178899082569 435 74 99 2 1 434 472 905 PREDICTED: Mytilus californianus tubulin alpha-1A chain (LOC127707878), transcript variant X1, mRNA blastn 41297 381 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
2705329 2705329 PRJNA1010780_S_NODE_21223_length_377_cov_6.900585_g19934_i0 PRJNA1010780 21223 377 6.900585 26.01520545 Argopecten irradians 31199 Mollusca Mollusca 115 4.51e-21   NTclustered gi|2835371197|ref|XM_069259864.1| 31199 g19934 i0 81.119 9.20159151193634 143 27 38 0 9 151 323 465 PREDICTED: Argopecten irradians histone H2A (LOC138317890), mRNA blastn 3469 115 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
3552125 3552125 PRJNA1010780_S_NODE_29583_length_268_cov_9.068670_g28294_i0 PRJNA1010780 29583 268 9.06867 24.3040356 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 320 6.09e-83   NTclustered gi|2506342741|ref|XM_050562692.2| 6465 g28294 i0 88.593 94.5932835820896 263 30 98 0 1 263 178 440 PREDICTED: Patella vulgata tubulin alpha-1A chain (LOC126832008), mRNA blastn 25351 320 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
5258014 5258014 PRJNA1010780_S_NODE_31865_length_250_cov_3.967442_g30576_i0 PRJNA1010780 31865 250 3.967442 9.918605 Saccostrea echinata 191078 Mollusca Mollusca 60.2 1.35e-4   NTclustered gi|2628374058|ref|XM_061332934.1| 191078 g30576 i0 89.362 0.324 47 5 19 0 181 227 9530 9576 PREDICTED: Saccostrea echinata mucin-2-like (LOC133197092), mRNA blastn 81 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
6533398 6533398 PRJNA1010780_S_NODE_59286_length_156_cov_2.008264_g57997_i0 PRJNA1010780 59286 156 2.008264 3.13289184 Biomphalaria glabrata 6526 Mollusca Mollusca 111 2.09e-20   NTclustered gi|2502152010|ref|XM_013209070.2| 6526 g57997 i0 83.333 3.07692307692308 120 20 77 0 1 120 1134 1253 PREDICTED: Biomphalaria glabrata GTP-binding protein 1-like (LOC106053511), transcript variant X1, mRNA blastn 480 111 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
6533428 6533428 PRJNA1010780_S_NODE_8166_length_902_cov_7.197232_g7352_i0 PRJNA1010780 8166 902 7.197232 64.91903264 Patella vulgata 6465 Mollusca Mollusca 385 7.91e-102   NTclustered gi|2506330923|ref|XM_050549233.2| 6465 g7352 i0 80.426 8.68957871396896 516 91 57 9 364 874 658 148 PREDICTED: Patella vulgata ras-related protein Rab-1A (LOC126820989), mRNA blastn 7838 385 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
7807658 7807658 PRJNA1010780_S_NODE_31047_length_257_cov_1.810811_g29758_i0 PRJNA1010780 31047 257 1.810811 4.65378427 Dreissena polymorpha 45954 Mollusca Mollusca 63.9 1.08e-5   NTclustered gi|2364458853|ref|XM_052426802.1| 45954 g29758 i0 84.615 0.252918287937743 65 8 25 2 44 107 3473 3410 PREDICTED: Dreissena polymorpha streptococcal hemagglutinin-like (LOC127879755), mRNA blastn 65 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
7807694 7807694 PRJNA1010780_S_NODE_38007_length_215_cov_3.738889_g36718_i0 PRJNA1010780 38007 215 3.738889 8.03861135 Crassostrea virginica 6565 Mollusca Mollusca 52.8 0.019   NTclustered gi|1242775217|ref|XM_022471507.1| 6565 g36718 i0 96.774 0.144186046511628 31 1 14 0 64 94 440 410 PREDICTED: Crassostrea virginica zinc finger CCHC domain-containing protein 10-like (LOC111126692), mRNA blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
9082619 9082619 PRJNA1010780_S_NODE_24368_length_325_cov_3.551724_g23079_i0 PRJNA1010780 24368 325 3.551724 11.543103 Lottia gigantea 225164 Mollusca Mollusca 244 4.69e-60   NTclustered gi|676474378|ref|XM_009061879.1| 225164 g23079 i0 80.892 14.510769230769201 314 57 96 3 2 314 3 314 Lottia gigantea hypothetical protein partial mRNA blastn 4716 244 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
9082733 9082733 PRJNA1010780_S_NODE_55728_length_163_cov_1.140625_g54439_i0 PRJNA1010780 55728 163 1.140625 1.85921875 Mytilus edulis 6550 Mollusca Mollusca 156 1.01e-33   NTclustered gi|2912449415|ref|XM_071275985.1| 6550 g54439 i0 84.615 34.8711656441718 156 24 96 0 4 159 1402 1557 PREDICTED: Mytilus edulis aconitate hydratase, mitochondrial-like (LOC139489502), mRNA blastn 5684 156 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
10358219 10358219 PRJNA1010780_S_NODE_24589_length_322_cov_6.198606_g23300_i0 PRJNA1010780 24589 322 6.198606 19.95951132 Patella vulgata 6465 Mollusca Mollusca 209 1.69e-49   NTclustered gi|2506324074|ref|XM_050544660.2| 6465 g23300 i0 81.569 14.5434782608696 255 45 79 2 56 309 893 640 PREDICTED: Patella vulgata ribosome biogenesis protein NSA2 homolog (LOC126817590), mRNA blastn 4683 209 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
10358298 10358298 PRJNA1010780_S_NODE_41949_length_199_cov_2.481707_g40660_i0 PRJNA1010780 41949 199 2.481707 4.93859693 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.017   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g40660 i0 100 0.14070351758794 28 0 14 0 96 123 3765913 3765940 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11633780 11633780 PRJNA1010780_S_NODE_41910_length_199_cov_3.262195_g40621_i0 PRJNA1010780 41910 199 3.262195 6.49176805 Biomphalaria glabrata 6526 Mollusca Mollusca 69.4 1.71e-7   NTclustered gi|2502105575|ref|XM_056043367.1| 6526 g40621 i0 85.294 1.15577889447236 68 9 34 1 3 70 1053 1119 PREDICTED: Biomphalaria glabrata procathepsin L-like (LOC106063347), transcript variant X2, mRNA blastn 230 69.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
11633826 11633826 PRJNA1010780_S_NODE_52470_length_169_cov_1.880597_g51181_i0 PRJNA1010780 52470 169 1.880597 3.17820893 Bradybaena similaris 145626 Mollusca Mollusca 63.9 6.52e-6   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g51181 i0 77.273 3.55029585798817 110 23 64 2 21 129 73219902 73220010 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 600 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11633829 11633829 PRJNA1010780_S_NODE_53950_length_166_cov_1.702290_g52661_i0 PRJNA1010780 53950 166 1.70229 2.8258014 Pecten maximus 6579 Mollusca Mollusca 63.9 6.42e-6   NTclustered gi|1835500268|ref|XM_033899849.1| 6579 g52661 i0 97.297 0.22289156626506 37 1 22 0 47 83 109 145 PREDICTED: Pecten maximus 40S ribosomal protein S2 (LOC117338490), mRNA blastn 37 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
12908843 12908843 PRJNA1010780_S_NODE_37811_length_216_cov_3.176796_g36522_i0 PRJNA1010780 37811 216 3.176796 6.86187936 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.019   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g36522 i0 100 0.12962962962963 28 0 13 0 66 93 71138465 71138492 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
14183808 14183808 PRJNA1010780_S_NODE_42792_length_196_cov_2.298137_g41503_i0 PRJNA1010780 42792 196 2.298137 4.50434852 Patella vulgata 6465 Mollusca Mollusca 130 7.61e-26   NTclustered gi|2506321360|ref|XM_050539615.2| 6465 g41503 i0 79.144 2.37755102040816 187 39 95 0 10 196 283 97 PREDICTED: Patella vulgata proteasome subunit alpha type-7 (LOC126814465), mRNA blastn 466 130 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
15457684 15457684 PRJNA1010780_S_NODE_22373_length_356_cov_9.542056_g21084_i0 PRJNA1010780 22373 356 9.542056 33.96971936 Argopecten irradians 31199 Mollusca Mollusca 115 4.2400000000000005e-21   NTclustered gi|2835371197|ref|XM_069259864.1| 31199 g21084 i0 81.119 9.74438202247191 143 27 40 0 206 348 465 323 PREDICTED: Argopecten irradians histone H2A (LOC138317890), mRNA blastn 3469 115 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
15457704 15457704 PRJNA1010780_S_NODE_27093_length_292_cov_10.346304_g25804_i0 PRJNA1010780 27093 292 10.346304 30.21120768 Lottia gigantea 225164 Mollusca Mollusca 326 1.44e-84   NTclustered gi|676453046|ref|XM_009054981.1| 225164 g25804 i0 86.897 90.4965753424657 290 38 99 0 3 292 434 145 Lottia gigantea hypothetical protein mRNA blastn 26425 326 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
15457800 15457800 PRJNA1010780_S_NODE_53673_length_167_cov_1.166667_g52384_i0 PRJNA1010780 53673 167 1.166667 1.94833389 Ostrea edulis 37623 Mollusca Mollusca 69.4 1.39e-7   NTclustered gi|2507408586|ref|XM_056140807.1| 37623 g52384 i0 95.349 0.772455089820359 43 2 26 0 35 77 341 299 PREDICTED: Ostrea edulis 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial-like (LOC125646031), transcript variant X3, mRNA blastn 129 69.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
16304072 16304072 PRJNA1010780_S_NODE_60393_length_154_cov_2.436975_g59104_i0 PRJNA1010780 60393 154 2.436975 3.7529415 Octopus 6643 Mollusca Mollusca 139 9.43e-29   NTclustered gi|7416002|dbj|AB025781.1| 6645 g59104 i0 83.226 23.1428571428571 155 22 99 4 1 153 1025 873 Octopus vulgaris OvGao mRNA for G protein a subunit o class, complete cds blastn 3564 139 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus vulgaris
16731913 16731913 PRJNA1010780_S_NODE_11374_length_693_cov_3.595745_g10342_i0 PRJNA1010780 11374 693 3.595745 24.91851285 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.019   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g10342 i0 100 0.0418470418470418 29 0 4 0 311 339 73038653 73038681 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18006998 18006998 PRJNA1010780_S_NODE_61115_length_153_cov_2.025424_g59826_i0 PRJNA1010780 61115 153 2.025424 3.09889872 Mytilus californianus 6549 Mollusca Mollusca 52.8 0.013   NTclustered gi|2334707183|ref|XM_052244339.1| 6549 g59826 i0 100 0.183006535947712 28 0 18 0 1 28 1837 1864 PREDICTED: Mytilus californianus elongation factor 2-like (LOC127734456), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
19280655 19280655 PRJNA1010780_S_NODE_28996_length_273_cov_4.226891_g27707_i0 PRJNA1010780 28996 273 4.226891 11.53941243 Patella vulgata 6465 Mollusca Mollusca 63.9 1.16e-5   NTclustered gi|2506329353|ref|XM_050550461.2| 6465 g27707 i0 87.273 1.00732600732601 55 7 20 0 21 75 4034 3980 PREDICTED: Patella vulgata E3 ubiquitin-protein ligase HECTD1 (LOC126821879), transcript variant X4, mRNA blastn 275 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
19280769 19280769 PRJNA1010780_S_NODE_62716_length_151_cov_1.577586_g61427_i0 PRJNA1010780 62716 151 1.577586 2.38215486 Crassostrea virginica 6565 Mollusca Mollusca 102 1.21e-17   NTclustered gi|1242845784|ref|XM_022448523.1| 6565 g61427 i0 87.5 1.35099337748344 88 11 58 0 32 119 1013 926 PREDICTED: Crassostrea virginica 26S proteasome regulatory subunit 8 (LOC111111505), mRNA blastn 204 102 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
20556265 20556265 PRJNA1010780_S_NODE_24917_length_318_cov_2.469965_g23628_i0 PRJNA1010780 24917 318 2.469965 7.8544887 Bradybaena similaris 145626 Mollusca Mollusca 62.1 4.95e-5   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g23628 i0 89.583 1.61006289308176 48 5 15 0 100 147 21033234 21033281 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 512 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20556358 20556358 PRJNA1010780_S_NODE_45377_length_188_cov_1.274510_g44088_i0 PRJNA1010780 45377 188 1.27451 2.3960788 Aplysia californica 6500 Mollusca Mollusca 52.8 0.016   NTclustered gi|1897919414|ref|XM_035968861.1| 6500 g44088 i0 100 0.148936170212766 28 0 15 0 28 55 1784 1811 PREDICTED: Aplysia californica uncharacterized LOC118477429 (LOC118477429), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
21831822 21831822 PRJNA1010780_S_NODE_16338_length_497_cov_5.199134_g15093_i0 PRJNA1010780 16338 497 5.199134 25.83969598 Mytilus trossulus 6551 Mollusca Mollusca 54.7 0.013   NTclustered gi|2693950141|ref|XM_063559878.1| 6551 g15093 i0 79.012 0.162977867203219 81 15 16 2 312 391 4560 4481 PREDICTED: Mytilus trossulus mucin-3B-like (LOC134697594), mRNA blastn 81 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
21831897 21831897 PRJNA1010780_S_NODE_29798_length_266_cov_16.350649_g28509_i0 PRJNA1010780 29798 266 16.350649 43.49272634 Biomphalaria glabrata 6526 Mollusca Mollusca 182 2.97e-41   NTclustered gi|2502149611|ref|XM_056020795.1| 6526 g28509 i0 86.957 17.7932330827068 161 21 61 0 106 266 156 316 PREDICTED: Biomphalaria glabrata 40S ribosomal protein S14 (LOC106056330), mRNA blastn 4733 182 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
23107489 23107489 PRJNA1010780_S_NODE_51239_length_172_cov_1.817518_g49950_i0 PRJNA1010780 51239 172 1.817518 3.12613096 Gigantopelta aegis 1735272 Mollusca Mollusca 124 3.01e-24   NTclustered gi|2034312084|ref|XM_041497606.1| 1735272 g49950 i0 85.246 38.703488372093 122 16 70 2 52 172 271 151 PREDICTED: Gigantopelta aegis ubiquitin-40S ribosomal protein S27a (LOC121371597), mRNA blastn 6657 124 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
23107525 23107525 PRJNA1010780_S_NODE_59059_length_157_cov_1.098361_g57770_i0 PRJNA1010780 59059 157 1.098361 1.72442677 Patella vulgata 6465 Mollusca Mollusca 139 9.67e-29   NTclustered gi|2506332203|ref|XM_050552075.2| 6465 g57770 i0 83.117 11.1146496815287 154 24 97 2 2 154 540 388 PREDICTED: Patella vulgata NADH-ubiquinone oxidoreductase subunit 8 (LOC126823317), mRNA blastn 1745 139 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;