RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1010780" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10358287 10358287 PRJNA1010780_S_NODE_3929_length_1362_cov_9.969103_g3536_i0 PRJNA1010780 3929 1362 9.969103 135.77918286 Thermoplasmata archaeon 1906666 Archaea Archaea 54.7 0.039   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g3536 i0 100 0.0212922173274596 29 0 2 0 359 387 1587405 1587433 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 29 54.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
23107396 23107396 PRJNA1010780_S_NODE_27799_length_285_cov_2.404000_g26510_i0 PRJNA1010780 27799 285 2.404 6.8514 Methanobrevibacter sp. TLL-48-HuF1 2870563 Archaea Archaea 56.5 0.002   NTclustered gi|2246976648|gb|CP081485.1| 2870563 g26510 i0 100 0.4 30 0 11 0 86 115 73919 73890 Methanobrevibacter sp. TLL-48-HuF1 chromosome, complete genome blastn 114 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. TLL-48-HuF1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;