RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1010780" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA1010780 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9082534 9082534 PRJNA1010780_S_NODE_12108_length_658_cov_3.547352_g11032_i0 PRJNA1010780 12108 658 3.547352 23.34157616 Tupanvirus salinum 3060758 Viruses Viruses 97.1 2.98e-15   NTclustered gi|2500358058|ref|NC_075039.1| 2126985 g11032 i0 82.759 1.59422492401216 116 13 17 6 331 443 450250 450361 Tupanvirus soda lake, partial genome blastn 1049 97.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
14183678 14183678 PRJNA1010780_S_NODE_1552_length_1968_cov_6.409208_g1374_i0 PRJNA1010780 1552 1968 6.409208 126.13321344 Parapoxvirus orf 3431389 Viruses Viruses 69.4 2.02e-6   NTclustered gi|2755084441|gb|PP943425.1| 10258 g1374 i0 97.561 0.0401422764227642 41 0 2 1 8 47 67788 67828 Orf virus isolate FX10, partial genome blastn 79 69.4 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
21403615 21403615 PRJNA1010780_S_NODE_24977_length_317_cov_3.216312_g23688_i0 PRJNA1010780 24977 317 3.216312 10.19570904 Mimivirus 315393 Viruses Viruses 86.1 2.93e-12   NTclustered gi|2574490570|gb|OQ700913.1| 212035 g23688 i0 90.769 1.46372239747634 65 5 20 1 237 300 464070 464006 Mutant Acanthamoeba polyphaga mimivirus isolate KO_qu_143, complete genome blastn 464 86.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus bradfordmassiliense
23107445 23107445 PRJNA1010780_S_NODE_38439_length_213_cov_4.421348_g37150_i0 PRJNA1010780 38439 213 4.421348 9.41747124 Megavirus powaiense 3060302 Viruses Viruses 52.8 0.019   NTclustered gi|2500352667|ref|NC_075034.1| 1842663 g37150 i0 100 0.131455399061033 28 0 13 0 156 183 432827 432854 Powai lake megavirus isolate 1, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Megavirus powaiense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;