RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1010780" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 7 ✖

bioproject 1

  • PRJNA1010780 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
155240 155240 PRJNA1010780_S_NODE_54161_length_166_cov_1.106870_g52872_i0 PRJNA1010780 54161 166 1.10687 1.8374042 Hypotrichomonas acosta 5735 Parabasalia other_Eukaryota 171 3.68e-38   NTclustered gi|33465430|gb|AY277780.1| 5735 g52872 i0 85.714 22.578313253012 161 23 97 0 2 162 17 177 Hypotrichomonas acosta strain ATCC 30069 beta-tubulin 3 gene, partial cds blastn 3748 171 1 Eukaryota Metamonada   Parabasalia   Hypotrichomonadida Hypotrichomonadidae Hypotrichomonas Hypotrichomonas acosta
1429869 1429869 PRJNA1010780_S_NODE_22562_length_353_cov_3.050314_g21273_i0 PRJNA1010780 22562 353 3.050314 10.76760842 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 7.17e-4   NTclustered gi|2794952209|ref|XM_067875376.1| 2049356 g21273 i0 97.059 1.3399433427762 34 1 10 0 137 170 7771 7804 Monocercomonoides exilis uncharacterized protein (MONOS_5246), partial mRNA blastn 473 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
2705472 2705472 PRJNA1010780_S_NODE_57043_length_160_cov_1.768000_g55754_i0 PRJNA1010780 57043 160 1.768 2.8288 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 56.5 0.001   NTclustered gi|2794869152|ref|XM_067917924.1| 135588 g55754 i0 89.13 0.2875 46 3 29 2 34 79 982 1025 Histomonas meleagridis TKL family protein kinase (GO595_004757), partial mRNA blastn 46 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
6533338 6533338 PRJNA1010780_S_NODE_42926_length_196_cov_1.490683_g41637_i0 PRJNA1010780 42926 196 1.490683 2.92173868 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 54.7 0.005   NTclustered gi|123416642|ref|XM_001304937.1| 412133 g41637 i0 100 1.14795918367347 29 0 15 0 160 188 4406 4378 Trichomonas vaginalis G3 protein CBG20215-related family (TVAGG3_0460930), partial mRNA blastn 225 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
12908725 12908725 PRJNA1010780_S_NODE_14011_length_579_cov_1.731618_g12839_i0 PRJNA1010780 14011 579 1.731618 10.02606822 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 76.8 3.39e-9   NTclustered gi|2794967278|ref|XM_067871996.1| 2049356 g12839 i0 79.439 0.459412780656304 107 22 18 0 250 356 427 533 Monocercomonoides exilis putative DEAD-box ATP-dependent RNA helicase 56 (MONOS_2099), mRNA blastn 266 76.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
12908869 12908869 PRJNA1010780_S_NODE_43571_length_193_cov_3.727848_g42282_i0 PRJNA1010780 43571 193 3.727848 7.19474664 Trimastix marina 137419 Preaxostyla other_Eukaryota 158 3.43e-34   NTclustered gi|84105342|gb|DQ295218.1| 137419 g42282 i0 81.675 9.89119170984456 191 33 98 2 1 190 709 898 Trimastix marina beta tubulin gene, partial cds blastn 1909 158 1 Eukaryota Metamonada   Preaxostyla     Trimastigidae Trimastix Trimastix marina
19280786 19280786 PRJNA1010780_S_NODE_9036_length_835_cov_18.248750_g8154_i0 PRJNA1010780 9036 835 18.24875 152.3770625 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 86.1 8.28e-12   NTclustered gi|2794895333|ref|XM_067923466.1| 135588 g8154 i0 82.407 0.168862275449102 108 10 12 6 83 184 663 559 Histomonas meleagridis XYPPX repeat family protein (GO595_009747), partial mRNA blastn 141 86.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;