RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 8 ✖

bioproject 1

  • PRJNA1010662 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1001472 1001472 PRJNA1010662_S_NODE_2841_length_198_cov_1.858065_g2796_i0 PRJNA1010662 2841 198 1.858065 3.6789687 Pestivirus 11095 Viruses Viruses 300 5.55e-77   NTclustered gi|800924334|gb|KP941592.1| 11099 g2796 i0 93.939 99.2323232323232 198 12 100 0 1 198 8789 8986 Bovine viral diarrhea virus 1 strain USMARC-55926 polyprotein gene, complete cds blastn 19648 300 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Pestivirus Pestivirus bovis
2705231 2705231 PRJNA1010662_S_NODE_3823_length_175_cov_1.954545_g3778_i0 PRJNA1010662 3823 175 1.954545 3.42045375 Sopidub virus 3131684 Viruses Viruses 141 3.06e-29   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g3778 i0 88.136 8.46857142857143 118 14 67 0 48 165 2145 2262 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 1482 141 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
4829483 4829483 PRJNA1010662_S_NODE_384_length_431_cov_5.097938_g339_i0 PRJNA1010662 384 431 5.097938 21.97211278 root 1 Root_unresolved Root_unresolved 756 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g339 i0 99.758 95.8074245939675 413 0 96 1 14 426 17212 16801 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 41293 756 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
5257865 5257865 PRJNA1010662_P_NODE_9565_length_187_cov_2.623188_g9506_i0 PRJNA1010662 9565 187 2.623188 4.90536156 Sopidub virus 3131684 Viruses Viruses 117 5.600000000000001e-22   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g9506 i0 88.542 54.8877005347594 96 11 51 0 1 96 2225 2130 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 10264 117 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
5257904 5257904 PRJNA1010662_S_NODE_725_length_337_cov_2.676871_g680_i0 PRJNA1010662 725 337 2.676871 9.02105527 Caudoviricetes sp. 2832643 Viruses Viruses 425 1.63e-114   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g680 i0 90.03 353.878338278932 331 29 97 4 1 328 17851 18180 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 119257 425 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9082354 9082354 PRJNA1010662_P_NODE_15368_length_164_cov_0.904348_g15309_i0 PRJNA1010662 15368 164 0.904348 1.48313072 Caudoviricetes sp. 2832643 Viruses Viruses 159 7.84e-35   NTclustered gi|2914780835|gb|OR222308.1| 2832643 g15309 i0 86.076 8.13414634146342 158 10 91 10 1 150 1367 1214 MAG: Caudoviricetes sp. isolate MSP0659 genomic sequence blastn 1334 159 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11633531 11633531 PRJNA1010662_P_NODE_6090_length_222_cov_1.416185_g6031_i0 PRJNA1010662 6090 222 1.416185 3.1439307 Microbacterium phage Lyell 2250351 Viruses Viruses 52.8 0.02   NTclustered gi|1428086676|gb|MH371109.1| 2250351 g6031 i0 96.875 0.144144144144144 32 0 14 1 135 165 58114 58145 Microbacterium phage Lyell, complete genome blastn 32 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Microbacterium phage Lyell
16731875 16731875 PRJNA1010662_S_NODE_1734_length_239_cov_2.020408_g1689_i0 PRJNA1010662 1734 239 2.020408 4.82877512 Caudoviricetes sp. 2832643 Viruses Viruses 403 5.15e-108   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g1689 i0 97.071 287.573221757322 239 7 100 0 1 239 18075 18313 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 68730 403 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;