RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010662 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
154931 154931 PRJNA1010662_P_NODE_3701_length_271_cov_1.855856_g3642_i0 PRJNA1010662 3701 271 1.855856 5.02936976 Linderina pennispora 61395 Fungi Fungi 156 1.84e-33   NTclustered gi|2028313130|ref|XM_040891190.1| 61395 g3642 i0 87.879 22.9594095940959 132 16 49 0 139 270 597 728 Linderina pennispora uncharacterized protein (DL89DRAFT_320180), partial mRNA blastn 6222 156 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
1429753 1429753 PRJNA1010662_S_NODE_1762_length_237_cov_2.938144_g1717_i0 PRJNA1010662 1762 237 2.938144 6.96340128 Piptocephalis moniliformis 78909 Fungi Fungi 156 1.58e-33   NTclustered gi|913748581|ref|NG_042414.1| 78909 g1717 i0 92.593 43.2827004219409 108 8 46 0 1 108 2452 2345 Piptocephalis moniliformis NRRL 13723 28S rRNA, partial sequence; from TYPE material blastn 10258 156 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis moniliformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;