RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010662 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2276665 2276665 PRJNA1010662_S_NODE_782_length_328_cov_5.519298_g737_i0 PRJNA1010662 782 328 5.519298 18.10329744 Eurotatoria 2816136 Rotifera other_Eukaryota 507 5.48e-139   NTclustered gi|37785582|gb|AY210469.1| 96448 g737 i0 94.562 51.9878048780488 331 12 100 5 1 328 2198 2525 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 17052 512 0.990234375 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
7379075 7379075 PRJNA1010662_S_NODE_3706_length_177_cov_2.992537_g3661_i0 PRJNA1010662 3706 177 2.992537 5.29679049 Eurotatoria 2816136 Rotifera other_Eukaryota 311 2.23e-80   NTclustered gi|72153748|gb|DQ089741.1| 338910 g3661 i0 98.305 26.4011299435028 177 3 100 0 1 177 1727 1551 Anomopus telphusae 28S ribosomal RNA gene, partial sequence blastn 4673 311 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Anomopus Anomopus telphusae
8654636 8654636 PRJNA1010662_S_NODE_4327_length_166_cov_2.796748_g4282_i0 PRJNA1010662 4327 166 2.796748 4.64260168 Metazoa 33208 Rotifera other_Eukaryota 265 1.64e-66   NTclustered gi|37785582|gb|AY210469.1| 96448 g4282 i0 95.758 84.2469879518072 165 5 98 2 1 163 2052 2216 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 13985 265 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
9082469 9082469 PRJNA1010662_S_NODE_1768_length_237_cov_1.623711_g1723_i0 PRJNA1010662 1768 237 1.623711 3.84819507 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 392 1.0999999999999999e-104   NTclustered gi|999845569|gb|KT729748.1| 104777 g1723 i0 96.996 81.4725738396624 233 7 98 0 5 237 1 233 Brachionus calyciflorus isolate 7B4 28S ribosomal RNA gene, partial sequence blastn 19309 392 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
11204758 11204758 PRJNA1010662_S_NODE_2129_length_222_cov_2.553073_g2084_i0 PRJNA1010662 2129 222 2.553073 5.66782206 Metazoa 33208 Rotifera other_Eukaryota 316 6.319999999999998e-82   NTclustered gi|259129963|gb|GQ398061.1| 104782 g2084 i0 92.342 75.5675675675676 222 17 100 0 1 222 6897 6676 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 16776 318 0.993710691823899 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14183641 14183641 PRJNA1010662_S_NODE_5012_length_156_cov_1.938053_g4967_i0 PRJNA1010662 5012 156 1.938053 3.02336268 Anomopus telphusae 338910 Rotifera other_Eukaryota 289 9e-74   NTclustered gi|72153665|gb|DQ089732.1| 338910 g4967 i0 100 100 156 0 100 0 1 156 944 1099 Anomopus telphusae 18S ribosomal RNA gene, complete sequence blastn 15600 289 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Anomopus Anomopus telphusae
20556129 20556129 PRJNA1010662_S_NODE_1397_length_258_cov_3.930233_g1352_i0 PRJNA1010662 1397 258 3.930233 10.14000114 Brachionus plicatilis 10195 Rotifera other_Eukaryota 470 5.47e-128   NTclustered gi|37788165|gb|AY218118.1| 10195 g1352 i0 99.611 99.0193798449612 257 1 99 0 2 258 897 641 Brachionus plicatilis strain L 18S ribosomal RNA gene, partial sequence blastn 25547 470 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
22678300 22678300 PRJNA1010662_S_NODE_3178_length_189_cov_5.424658_g3133_i0 PRJNA1010662 3178 189 5.424658 10.25260362 Eurotatoria 2816136 Rotifera other_Eukaryota 337 4e-88   NTclustered gi|37785582|gb|AY210469.1| 96448 g3133 i0 98.942 58.3015873015873 189 1 99 1 1 188 1568 1756 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 11019 339 0.994100294985251 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
24381011 24381011 PRJNA1010662_S_NODE_340_length_450_cov_2.739558_g295_i0 PRJNA1010662 340 450 2.739558 12.328011 Adineta vaga 104782 Rotifera other_Eukaryota 778 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g295 i0 99.076 78.9844444444444 433 4 96 0 1 433 4592 4160 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 35543 778 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
24381022 24381022 PRJNA1010662_S_NODE_4280_length_167_cov_1.919355_g4235_i0 PRJNA1010662 4280 167 1.919355 3.20532285 Brachionus patulus 160652 Rotifera other_Eukaryota 270 3.5499999999999993e-68   NTclustered gi|61200806|gb|AY829084.1| 160652 g4235 i0 95.808 10.0119760479042 167 7 100 0 1 167 1817 1983 Brachionus patulus 28S ribosomal RNA gene, partial sequence blastn 1672 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;