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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010662 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1429742 1429742 PRJNA1010662_P_NODE_9322_length_189_cov_1.478571_g9263_i0 PRJNA1010662 9322 189 1.478571 2.79449919 Ruditapes philippinarum 129788 Mollusca Mollusca 54.7 0.005   NTclustered gi|2616486233|ref|XM_060711654.1| 129788 g9263 i0 100 0.153439153439153 29 0 15 0 4 32 1600 1572 PREDICTED: Ruditapes philippinarum ribosome biogenesis protein BMS1 homolog (LOC132726339), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
9082376 9082376 PRJNA1010662_P_NODE_2228_length_341_cov_1.397260_g2169_i0 PRJNA1010662 2228 341 1.39726 4.7646566 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.032   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g2169 i0 100 0.0821114369501466 28 0 8 0 171 198 92497192 92497165 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
10358111 10358111 PRJNA1010662_S_NODE_4269_length_167_cov_2.266129_g4224_i0 PRJNA1010662 4269 167 2.266129 3.78443543 Physella acuta 109671 Mollusca Mollusca 252 1.29e-62   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g4224 i0 94.048 2.91616766467066 168 6 99 3 1 166 3769 3604 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 487 252 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
11633486 11633486 PRJNA1010662_P_NODE_210_length_1017_cov_2.786157_g178_i0 PRJNA1010662 210 1017 2.786157 28.33521669 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.008   NTclustered gi|2334761577|ref|XM_052209329.1| 6549 g178 i0 100 0.325467059980334 30 0 3 0 74 103 1009 980 PREDICTED: Mytilus californianus uncharacterized LOC127705057 (LOC127705057), transcript variant X3, mRNA blastn 331 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
14183491 14183491 PRJNA1010662_P_NODE_10712_length_179_cov_1.800000_g10653_i0 PRJNA1010662 10712 179 1.8 3.222 Argopecten irradians 31199 Mollusca Mollusca 132 1.89e-26   NTclustered gi|2835350600|ref|XM_069247595.1| 31199 g10653 i0 96.25 45.1173184357542 80 3 45 0 2 81 1363 1442 PREDICTED: Argopecten irradians tubulin beta-4B chain-like (LOC138306988), mRNA blastn 8076 132 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
15457432 15457432 PRJNA1010662_P_NODE_10293_length_182_cov_1.894737_g10234_i0 PRJNA1010662 10293 182 1.894737 3.44842134 Gigantopelta aegis 1735272 Mollusca Mollusca 54.7 0.004   NTclustered gi|2034285543|ref|XM_041517125.1| 1735272 g10234 i0 100 1.74175824175824 29 0 16 0 50 78 7723 7695 PREDICTED: Gigantopelta aegis serine-rich adhesin for platelets-like (LOC121386278), transcript variant X3, mRNA blastn 317 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
15457437 15457437 PRJNA1010662_P_NODE_10793_length_179_cov_1.253846_g10734_i0 PRJNA1010662 10793 179 1.253846 2.24438434 Aplysia californica 6500 Mollusca Mollusca 58.4 3.26e-4   NTclustered gi|871210487|ref|XM_005090905.2| 6500 g10734 i0 97.143 0.58659217877095 35 0 20 1 5 39 148 181 PREDICTED: Aplysia californica pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (LOC101860305), mRNA blastn 105 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
21403565 21403565 PRJNA1010662_S_NODE_3657_length_179_cov_0.676471_g3612_i0 PRJNA1010662 3657 179 0.676471 1.21088309 Cephalopoda 6605 Mollusca Mollusca 331 1.74e-86   NTclustered gi|49482076|gb|AY557471.1| 6610 g3612 i0 100 100 179 0 100 0 1 179 1393 1571 Sepia officinalis 18S ribosomal RNA gene, complete sequence blastn 17900 331 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Sepia Sepia officinalis
21831612 21831612 PRJNA1010662_P_NODE_10218_length_183_cov_1.335821_g10159_i0 PRJNA1010662 10218 183 1.335821 2.44455243 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.004   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g10159 i0 100 1.07650273224044 29 0 16 0 12 40 60080099 60080127 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 197 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
21831759 21831759 PRJNA1010662_S_NODE_3078_length_192_cov_0.409396_g3033_i0 PRJNA1010662 3078 192 0.409396 0.78604032 Dosidicus gigas 346249 Mollusca Mollusca 350 5.24e-92   NTclustered gi|1153234029|gb|KY387931.1| 346249 g3033 i0 99.479 100.208333333333 192 1 100 0 1 192 5664 5473 Dosidicus gigas isolate 9110X11 18S ribosomal RNA, complete sequence; and 28S ribosomal RNA, partial sequence blastn 19240 350 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Oegopsida Ommastrephidae Dosidicus Dosidicus gigas
22678273 22678273 PRJNA1010662_P_NODE_4598_length_248_cov_1.316583_g4539_i0 PRJNA1010662 4598 248 1.316583 3.26512584 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 292 1.21e-74   NTclustered gi|45439260|gb|AY485722.1| 264259 g4539 i0 87.903 99.7056451612903 248 30 100 0 1 248 24 271 Physa parkeri actin gene, partial cds blastn 24727 292 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella parkeri
25227739 25227739 PRJNA1010662_S_NODE_5020_length_156_cov_1.699115_g4975_i0 PRJNA1010662 5020 156 1.699115 2.6506194 Mytilus 6548 Mollusca Mollusca 289 9e-74   NTclustered gi|2912307082|ref|XR_011659443.1| 6550 g4975 i0 100 100.076923076923 156 0 100 0 1 156 787 632 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139504896), rRNA blastn 15612 289 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;