RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_phylum = "Ctenophora"

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tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010662 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
154946 154946 PRJNA1010662_P_NODE_4901_length_241_cov_1.927083_g4842_i0 PRJNA1010662 4901 241 1.927083 4.64427003 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 220 5.62e-53   NTclustered gi|2700943190|ref|XM_063832567.1| 2820187 g4842 i0 83.913 93.3195020746888 230 37 95 0 9 238 371 600 PREDICTED: Bolinopsis microptera tubulin beta chain-like (LOC134821791), mRNA blastn 22490 220 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
2705070 2705070 PRJNA1010662_P_NODE_10423_length_181_cov_1.840909_g10364_i0 PRJNA1010662 10423 181 1.840909 3.33204529 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 69.4 1.53e-7   NTclustered gi|2700974368|ref|XM_063828001.1| 2820187 g10364 i0 75.294 1.87845303867403 170 28 93 8 3 171 1640 1484 PREDICTED: Bolinopsis microptera fibrous sheath CABYR-binding protein-like (LOC134818440), transcript variant X1, mRNA blastn 340 69.4 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;