RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA1010662 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5257904 5257904 PRJNA1010662_S_NODE_725_length_337_cov_2.676871_g680_i0 PRJNA1010662 725 337 2.676871 9.02105527 Caudoviricetes sp. 2832643 Viruses Viruses 425 1.63e-114   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g680 i0 90.03 353.878338278932 331 29 97 4 1 328 17851 18180 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 119257 425 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9082354 9082354 PRJNA1010662_P_NODE_15368_length_164_cov_0.904348_g15309_i0 PRJNA1010662 15368 164 0.904348 1.48313072 Caudoviricetes sp. 2832643 Viruses Viruses 159 7.84e-35   NTclustered gi|2914780835|gb|OR222308.1| 2832643 g15309 i0 86.076 8.13414634146342 158 10 91 10 1 150 1367 1214 MAG: Caudoviricetes sp. isolate MSP0659 genomic sequence blastn 1334 159 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11633531 11633531 PRJNA1010662_P_NODE_6090_length_222_cov_1.416185_g6031_i0 PRJNA1010662 6090 222 1.416185 3.1439307 Microbacterium phage Lyell 2250351 Viruses Viruses 52.8 0.02   NTclustered gi|1428086676|gb|MH371109.1| 2250351 g6031 i0 96.875 0.144144144144144 32 0 14 1 135 165 58114 58145 Microbacterium phage Lyell, complete genome blastn 32 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Microbacterium phage Lyell
16731875 16731875 PRJNA1010662_S_NODE_1734_length_239_cov_2.020408_g1689_i0 PRJNA1010662 1734 239 2.020408 4.82877512 Caudoviricetes sp. 2832643 Viruses Viruses 403 5.15e-108   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g1689 i0 97.071 287.573221757322 239 7 100 0 1 239 18075 18313 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 68730 403 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;