RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1010662" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 1 ✖

bioproject 1

  • PRJNA1010662 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4829483 4829483 PRJNA1010662_S_NODE_384_length_431_cov_5.097938_g339_i0 PRJNA1010662 384 431 5.097938 21.97211278 root 1 Root_unresolved Root_unresolved 756 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g339 i0 99.758 95.8074245939675 413 0 96 1 14 426 17212 16801 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 41293 756 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;