RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA1010662 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9082326 9082326 PRJNA1010662_P_NODE_11188_length_176_cov_1.905512_g11129_i0 PRJNA1010662 11188 176 1.905512 3.35370112 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 202 1.39e-47   NTclustered gi|551620797|ref|XM_005790858.1| 280463 g11129 i0 88.957 83.4204545454545 163 18 93 0 1 163 843 681 Emiliania huxleyi CCMP1516 S-adenosyl-L-homocysteine hydrolase mRNA blastn 14682 202 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
19280420 19280420 PRJNA1010662_P_NODE_1996_length_359_cov_1.519355_g1937_i0 PRJNA1010662 1996 359 1.519355 5.45448445 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 263 1.44e-65   NTclustered gi|551548842|ref|XM_005762007.1| 280463 g1937 i0 85.214 5.46518105849582 257 36 71 2 103 358 402 147 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 1962 263 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;