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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1010662" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA1010662 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1429702 1429702 PRJNA1010662_P_NODE_4702_length_245_cov_9.285714_g4643_i0 PRJNA1010662 4702 245 9.285714 22.7499993 Cochliopodium minus 313997 Discosea other_Eukaryota 333 7.049999999999999e-87   NTclustered gi|330902862|gb|JF298257.1| 313997 g4643 i0 94.495 10.065306122449 218 8 89 4 3 219 218 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2466 333 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
2705085 2705085 PRJNA1010662_P_NODE_1303_length_449_cov_2.095000_g1244_i0 PRJNA1010662 1303 449 2.095 9.40655 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 414 4.81e-111   NTclustered gi|167859717|gb|EU273438.1| 1346289 g1244 i0 83.37 96.7483296213808 451 71 100 3 1 449 782 334 Telaepolella tubasferens clone 2 beta-tubulin gene, partial cds blastn 43440 414 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
3981360 3981360 PRJNA1010662_P_NODE_6084_length_222_cov_1.739884_g6025_i0 PRJNA1010662 6084 222 1.739884 3.86254248 Heterostelium album 2086695 Evosea other_Eukaryota 110 1.15e-19   NTclustered gi|1160571044|ref|XM_020575016.1| 670386 g6025 i0 83.193 1.01351351351351 119 20 54 0 5 123 317 435 Polysphondylium pallidum PN500 40S ribosomal protein S14 (rps14), partial mRNA blastn 225 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
3981379 3981379 PRJNA1010662_P_NODE_7364_length_207_cov_1.316456_g7305_i0 PRJNA1010662 7364 207 1.316456 2.72506392 Fuligo muscorum 947840 Evosea other_Eukaryota 145 2.9e-30   NTclustered gi|2574169361|gb|OP630995.1| 947840 g7305 i0 79.803 9.26086956521739 203 37 97 4 6 206 574 374 Fuligo muscorum strain MM46916 alpha-tubulin (aTUB) gene, partial cds blastn 1917 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo muscorum
9082370 9082370 PRJNA1010662_P_NODE_17068_length_159_cov_6.136364_g17009_i0 PRJNA1010662 17068 159 6.136364 9.75681876 Cochliopodium minus 313997 Discosea other_Eukaryota 294 1.98e-75   NTclustered gi|330902862|gb|JF298257.1| 313997 g17009 i0 100 17.0377358490566 159 0 100 0 1 159 259 417 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2709 294 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
9082496 9082496 PRJNA1010662_S_NODE_4068_length_170_cov_22.834646_g4023_i0 PRJNA1010662 4068 170 22.834646 38.8188982 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 296 5.95e-76   NTclustered gi|380350146|emb|HE605256.1| 590481 g4023 i0 99.387 32.3529411764706 163 1 96 0 8 170 246 408 Uncultured Amoebozoa genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, clone M6D-6 blastn 5500 296 1 Eukaryota Amoebozoa             uncultured Amoebozoa
10357986 10357986 PRJNA1010662_P_NODE_15569_length_164_cov_0.895652_g15510_i0 PRJNA1010662 15569 164 0.895652 1.46886928 Mastigella eilhardi 1580584 Evosea other_Eukaryota 224 2.74e-54   NTclustered gi|730326658|gb|KJ879559.1| 1580584 g15510 i0 91.411 103.164634146341 163 14 99 0 1 163 181 343 Mastigella eilhardi strain ATCC 50342 actin gene, partial cds blastn 16919 224 1 Eukaryota Amoebozoa   Evosea   Pelobiontida   Mastigella Mastigella eilhardi
11633496 11633496 PRJNA1010662_P_NODE_3030_length_296_cov_2.080972_g2971_i0 PRJNA1010662 3030 296 2.080972 6.15967712 Dictyostelium discoideum 44689 Evosea other_Eukaryota 111 4.47e-20   NTclustered gi|66823576|ref|XM_640051.1| 352472 g2971 i0 79.747 1.52027027027027 158 29 59 2 51 205 698 541 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0272356) mRNA, complete cds blastn 450 111 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
14183585 14183585 PRJNA1010662_P_NODE_5592_length_229_cov_2.416667_g5533_i0 PRJNA1010662 5592 229 2.416667 5.53416743 Cavenderia fasciculata 261658 Evosea other_Eukaryota 183 6.939999999999998e-42   NTclustered gi|470265381|ref|XM_004361428.1| 261658 g5533 i0 85.632 39.117903930131 174 25 76 0 53 226 78 251 Cavenderia fasciculata heat shock protein (hspB), partial mRNA blastn 8958 183 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
14183616 14183616 PRJNA1010662_S_NODE_1472_length_252_cov_2.181818_g1427_i0 PRJNA1010662 1472 252 2.181818 5.49818136 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 455 1.49e-123   NTclustered gi|365928255|gb|JN825705.1| 590481 g1427 i0 99.209 26.6785714285714 253 1 100 1 1 252 901 649 Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence blastn 6723 455 1 Eukaryota Amoebozoa             uncultured Amoebozoa
15029195 15029195 PRJNA1010662_P_NODE_14492_length_165_cov_1.775862_g14433_i0 PRJNA1010662 14492 165 1.775862 2.9301723 Entamoeba 5758 Evosea other_Eukaryota 130 6.2e-26   NTclustered gi|511085582|dbj|AK420038.1| 5759 g14433 i0 83.571 5.27878787878788 140 21 84 2 1 139 545 407 Entamoeba histolytica cDNA clone: Xeh-007B17, 26S protease regulatory subunit, putative, complete cds, strain: HM-1:IMSS blastn 871 130 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
15457530 15457530 PRJNA1010662_P_NODE_5613_length_229_cov_1.155556_g5554_i0 PRJNA1010662 5613 229 1.155556 2.64622324 Dictyostelium purpureum 5786 Evosea other_Eukaryota 93.5 1.2e-14   NTclustered gi|330843278|ref|XM_003293538.1| 5786 g5554 i0 91.176 5.5938864628821 68 6 30 0 1 68 1307 1374 Dictyostelium purpureum ubiquinone oxidoreductase (DICPUDRAFT_158468), partial mRNA blastn 1281 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18853130 18853130 PRJNA1010662_P_NODE_2515_length_323_cov_1.572993_g2456_i0 PRJNA1010662 2515 323 1.572993 5.08076739 Entamoeba 5758 Evosea other_Eukaryota 193 1.71e-44   NTclustered gi|158955|gb|M84652.1|ENHHSP70A 5759 g2456 i0 78.738 19.6191950464396 301 54 92 10 19 314 1105 1400 Entamoeba heat shock protein (Hsp70) mRNA, complete cds blastn 6337 193 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
19280400 19280400 PRJNA1010662_P_NODE_14436_length_165_cov_2.517241_g14377_i0 PRJNA1010662 14436 165 2.517241 4.15344765 Entamoeba dispar 46681 Evosea other_Eukaryota 110 8.07e-20   NTclustered gi|167079095|ref|XM_001740445.1| 370354 g14377 i0 90.476 4.18181818181818 84 6 51 2 65 148 515 434 Entamoeba dispar SAW760 RAC GTPase, putative (EDI_099270), partial mRNA blastn 690 110 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
23107144 23107144 PRJNA1010662_P_NODE_10879_length_178_cov_1.976744_g10820_i0 PRJNA1010662 10879 178 1.976744 3.51860432 Cochliopodium minus 313997 Discosea other_Eukaryota 239 1.08e-58   NTclustered gi|1914009695|gb|MT975597.1| 313997 g10820 i0 90.96 99.2303370786517 177 16 99 0 2 178 511 687 Cochliopodium minus clone 2 actin gene, partial cds blastn 17663 239 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
23107166 23107166 PRJNA1010662_P_NODE_14459_length_165_cov_2.103448_g14400_i0 PRJNA1010662 14459 165 2.103448 3.4706892 Cavenderia fasciculata 261658 Evosea other_Eukaryota 95.3 2.26e-15   NTclustered gi|470241167|ref|XM_004352107.1| 261658 g14400 i0 83.838 0.6 99 16 60 0 62 160 486 388 Cavenderia fasciculata 40S ribosomal protein S3 (rps3), partial mRNA blastn 99 95.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;