RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1009807" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1009807 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
154808 154808 PRJNA1009807_S_NODE_1_length_4543_cov_24.287078_g0_i0 PRJNA1009807 1 4543 24.287078 1103.36195354 Totivirus ichi 3432942 Viruses Viruses 8274 0   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g0 i0 99.538 23.9170151882016 4543 21 100 0 1 4543 4564 22 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 108655 8274 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
3981258 3981258 PRJNA1009807_S_NODE_4_length_2296_cov_13.323881_g3_i0 PRJNA1009807 4 2296 13.323881 305.91630776 Totivirus ni 3432954 Viruses Viruses 4091 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g3 i0 98.867 4.3366724738676 2294 24 99 2 2 2294 4614 2322 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 9957 4091 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
5257724 5257724 PRJNA1009807_S_NODE_3425_length_175_cov_10.860294_g3397_i0 PRJNA1009807 3425 175 10.860294 19.0055145 Partitiviridae sp. 1955170 Viruses Viruses 139 1.1000000000000002e-28   NTclustered gi|2120560008|gb|MZ556361.1| 1955170 g3397 i0 81.714 1.32 175 25 99 6 2 175 296 128 MAG: Partitiviridae sp. isolate R2-k141_1752734 putative RNA-dependent RNA polymerase gene, complete cds blastn 231 139 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.
6533013 6533013 PRJNA1009807_S_NODE_6_length_2205_cov_12.338873_g5_i0 PRJNA1009807 6 2205 12.338873 272.07214965 Totivirus ni 3432954 Viruses Viruses 4024 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g5 i0 99.682 3.61179138321995 2200 7 99 0 6 2205 2329 130 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 7964 4024 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
9082284 9082284 PRJNA1009807_S_NODE_2568_length_197_cov_4.063291_g2540_i0 PRJNA1009807 2568 197 4.063291 8.00468327 Chronazork virus 3129863 Viruses Viruses 117 5.96e-22   NTclustered gi|2717318517|gb|PP172260.1| 3129863 g2540 i0 78.155 1.04568527918782 206 29 98 11 4 197 315 114 MAG: Chronazork virus isolate CN1B_k141_46390 genomic sequence blastn 206 117 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chronazork virus
15457388 15457388 PRJNA1009807_S_NODE_1493_length_248_cov_3.138756_g1465_i0 PRJNA1009807 1493 248 3.138756 7.78411488 Chrocagosk virus 3129397 Viruses Viruses 104 6.11e-18   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g1465 i0 90 2.09274193548387 80 8 32 0 169 248 170 249 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 519 104 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;