RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1008624" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1008624 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6531982 6531982 PRJNA1008624_P_NODE_10126_length_262_cov_2.361502_g9938_i0 PRJNA1008624 10126 262 2.361502 6.18713524 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 407 4.43e-109   NTclustered gi|926460157|gb|KR132223.1| 282301 g9938 i0 94.981 0.988549618320611 259 13 99 0 4 262 274 532 Macrostomum lignano clone c100550_g1_i1 mRNA sequence blastn 259 407 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
15456825 15456825 PRJNA1008624_P_NODE_22453_length_183_cov_2.179104_g22265_i0 PRJNA1008624 22453 183 2.179104 3.98776032 Monotoplana cf. diorchis 104924 Platyhelminthes Platyhelminthes 73.1 1.2e-8   NTclustered gi|10944981|emb|AJ270174.1| 104924 g22265 i0 100 20.4535519125683 39 0 21 0 8 46 1633 1595 Monotoplana cf. diorchis partial 28S rRNA gene blastn 3743 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Monotoplanidae Monotoplana Monotoplana cf. diorchis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;